DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg16 and Copb2

DIOPT Version :9

Sequence 1:NP_001138124.2 Gene:Atg16 / 326115 FlyBaseID:FBgn0039705 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_056642.1 Gene:Copb2 / 50797 MGIID:1354962 Length:905 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg16NP_001138124.2 ATG16 11..197 CDD:285778
SynN 120..229 CDD:294095
WD40 322..605 CDD:238121
WD40 repeat 331..368 CDD:293791
WD40 <341..612 CDD:225201
WD40 repeat 374..410 CDD:293791
WD40 repeat 415..453 CDD:293791
WD40 repeat 461..491 CDD:293791
WD40 repeat 498..536 CDD:293791
WD40 repeat 544..579 CDD:293791
WD40 repeat 585..609 CDD:293791
Copb2NP_056642.1 WD40 8..297 CDD:238121
WD 1 13..52
WD40 repeat 19..55 CDD:293791
WD 2 55..94
WD 3 97..136
WD40 repeat 103..140 CDD:293791
WD 4 140..180
WD40 repeat 145..182 CDD:293791
WD 5 183..224
WD40 repeat 189..226 CDD:293791
WD 6 227..266
WD40 repeat 232..268 CDD:293791
Coatomer_WDAD 319..763 CDD:397941
WD 7 350..388
WD 8 390..425
WD 9 746..783
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 837..873
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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