Sequence 1: | NP_001138124.2 | Gene: | Atg16 / 326115 | FlyBaseID: | FBgn0039705 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_989402.1 | Gene: | dtl / 395039 | XenbaseID: | XB-GENE-985623 | Length: | 713 | Species: | Xenopus tropicalis |
Alignment Length: | 306 | Identity: | 78/306 - (25%) |
---|---|---|---|
Similarity: | 122/306 - (39%) | Gaps: | 59/306 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 318 ILMKFEAHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSVDFDSTG 382
Fly 383 AYILGT-SNDYGARVWTVMDN------RLRHTLTG-HSGKVMAAKYVQEPIKVVTGSHDRTLKIW 439
Fly 440 DLRSIA-CIETKFAGSSCNDLVTTDSLGSTIIS-GHYDKKIRFWDIRTEKQA---DDVLMPAKI- 498
Fly 499 ------------TSLDLSKDCNYLICSVRDDTIKLLDLR--KNQVISTF---TNEHFKISCDFAR 546
Fly 547 ASFNSSGLKIACGSADGAIYIWNVNG--FLEATLKGHSTAVNAVSW 590 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Atg16 | NP_001138124.2 | ATG16 | 11..197 | CDD:285778 | |
SynN | 120..229 | CDD:294095 | |||
WD40 | 322..605 | CDD:238121 | 78/302 (26%) | ||
WD40 repeat | 331..368 | CDD:293791 | 9/36 (25%) | ||
WD40 | <341..612 | CDD:225201 | 71/283 (25%) | ||
WD40 repeat | 374..410 | CDD:293791 | 9/42 (21%) | ||
WD40 repeat | 415..453 | CDD:293791 | 8/38 (21%) | ||
WD40 repeat | 461..491 | CDD:293791 | 11/33 (33%) | ||
WD40 repeat | 498..536 | CDD:293791 | 9/55 (16%) | ||
WD40 repeat | 544..579 | CDD:293791 | 10/36 (28%) | ||
WD40 repeat | 585..609 | CDD:293791 | 3/6 (50%) | ||
dtl | NP_989402.1 | WD 1 | 47..89 | ||
WD40 repeat | 53..95 | CDD:293791 | 0/4 (0%) | ||
WD40 | 55..390 | CDD:238121 | 78/306 (25%) | ||
WD 2 | 96..135 | 12/40 (30%) | |||
WD40 repeat | 102..138 | CDD:293791 | 9/37 (24%) | ||
WD 3 | 138..178 | 9/39 (23%) | |||
WD40 repeat | 143..193 | CDD:293791 | 13/54 (24%) | ||
DDB1-binding motif. /evidence=ECO:0000250 | 168..171 | 1/2 (50%) | |||
Nuclear localization signal. /evidence=ECO:0000255 | 197..204 | 3/12 (25%) | |||
WD 4 | 215..254 | 12/43 (28%) | |||
WD40 repeat | 220..264 | CDD:293791 | 16/47 (34%) | ||
DDB1-binding motif. /evidence=ECO:0000250 | 244..247 | 2/2 (100%) | |||
WD 5 | 270..309 | 7/38 (18%) | |||
WD40 repeat | 275..313 | CDD:293791 | 8/37 (22%) | ||
WD 6 | 314..355 | 11/45 (24%) | |||
WD40 repeat | 321..358 | CDD:293791 | 10/36 (28%) | ||
WD 7 | 359..399 | 5/11 (45%) | |||
WD40 repeat | 364..389 | CDD:293791 | 3/6 (50%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 474..544 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 604..623 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 635..700 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |