DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg16 and Wdtc1

DIOPT Version :9

Sequence 1:NP_001138124.2 Gene:Atg16 / 326115 FlyBaseID:FBgn0039705 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_955010.1 Gene:Wdtc1 / 230796 MGIID:2685541 Length:677 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg16NP_001138124.2 ATG16 11..197 CDD:285778
SynN 120..229 CDD:294095
WD40 322..605 CDD:238121
WD40 repeat 331..368 CDD:293791
WD40 <341..612 CDD:225201
WD40 repeat 374..410 CDD:293791
WD40 repeat 415..453 CDD:293791
WD40 repeat 461..491 CDD:293791
WD40 repeat 498..536 CDD:293791
WD40 repeat 544..579 CDD:293791
WD40 repeat 585..609 CDD:293791
Wdtc1NP_955010.1 WD40 <34..163 CDD:392136
WD 1 45..84
WD40 repeat 51..88 CDD:293791
WD 2 88..129
WD40 repeat 93..131 CDD:293791
WD 3 132..172
WD40 repeat 138..178 CDD:293791
WD 4 182..222
WD40 repeat 232..271 CDD:293791
WD 5 265..305
TPR 1 361..394
TPR repeat 365..389 CDD:276809
PLN03088 367..>437 CDD:215568
TPR repeat 394..427 CDD:276809
TPR 2 396..431
TPR repeat 432..456 CDD:276809
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 489..509
WD 6 535..575
WD40 repeat 537..577 CDD:293791
WD40 <546..>626 CDD:392136
WD 7 578..617
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 655..677
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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