DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE3 and P4ha1

DIOPT Version :9

Sequence 1:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_742059.2 Gene:P4ha1 / 64475 RGDID:621000 Length:534 Species:Rattus norvegicus


Alignment Length:499 Identity:148/499 - (29%)
Similarity:254/499 - (50%) Gaps:54/499 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DLMQLDVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKGREEEYLGNPLHSFPLIRHMYQD 90
            ||:..:.:|:.:|.:|.:..::|..|:|:.|::|.:...:|....|.::|:|:::|.|::.:..:
  Rat    30 DLIHNEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDRLTSTATKDPEGFVGHPVNAFKLMKRLNTE 94

  Fly    91 WRYLEEFMKKPVGEEEIQFLRRKLPELPWQVDTEEASVSIFRIAETYGMMPWDMANGLIDNVRFN 155
            |..||..:.|.:.:..|..|..:....|...|...|:.::||:.:||.:....::.|.:..|:..
  Rat    95 WSELENLILKDMSDGFISNLTIQRQYFPNDEDQVGAAKALFRLQDTYNLDTNTISKGNLPGVKHK 159

  Fly   156 STLPALDCFEVAKM-YFKWGYF------KQALQWI------TISKARMKEEYSGVYEVLGMNRQD 207
            |.|.|.||||:.|: |.:..|:      :|||..:      |:.|..:.:..|  |.|......|
  Rat   160 SFLTAEDCFELGKVAYTEADYYHTELWMEQALMQLEEGEMSTVDKVSVLDYLS--YAVYQQGDLD 222

  Fly   208 VALLQARCLVELDRRDEA-------HEVLLDQPDLADNSIS--LLDQFKANPYE---AIDSSPKL 260
            .|||..:.|:|||...:.       .|.::.:...|:.|.|  ..|| |..|.:   |:|..|: 
  Rat   223 KALLLTKKLLELDPEHQRANGNLVYFEYIMSKEKDANKSASGDQSDQ-KTTPKKKGIAVDYLPE- 285

  Fly   261 GEGYKRLCRS---SFSPNPSK-LHCRY-NSTTSAFLILAPLKMEEISLEPHIVVYHDILPDKDIQ 320
            .:.|:.|||.   ..:|...| |.||| :...:...||||.|.|:...:|.|:.:|||:.|.:|:
  Rat   286 RQKYEMLCRGEGIKMTPRRQKRLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIE 350

  Fly   321 QLITLAEPLLKPTEMFDDNKNE--------ARSSYRTPLGGPLLDSLTQRMRDITGLQIRQGNPI 377
            .:..||:|.|....:.|....:        ::|::.:....|::..:..|::|:|||.:.....:
  Rat   351 IVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEEL 415

  Fly   378 NIIKYGFGAPYTNYYDFFKKRNSES---KGFGDRMATFMFYLNDAPYGGATVFPRLNVKVPAERG 439
            .:..||.|..|..::||.:|...::   .|.|:|:||::||::|...|||||||.:...|..::|
  Rat   416 QVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKG 480

  Fly   440 KVLFWYNL----NGDTHDMEPTTMHAACPVFHGSKWVMTAWIHE 479
            ..:|||||    .||.     :|.||||||..|:|||...|:||
  Rat   481 TAVFWYNLFASGEGDY-----STRHAACPVLVGNKWVSNKWLHE 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 30/122 (25%)
P4Hc 316..478 CDD:214780 57/176 (32%)
P4ha1NP_742059.2 P4Ha_N 25..112 CDD:400573 20/81 (25%)
TPR 205..238 11/34 (32%)
P4Hc 345..518 CDD:214780 57/177 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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