DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE3 and zgc:152670

DIOPT Version :9

Sequence 1:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001070123.2 Gene:zgc:152670 / 557059 ZFINID:ZDB-GENE-060929-954 Length:490 Species:Danio rerio


Alignment Length:503 Identity:138/503 - (27%)
Similarity:227/503 - (45%) Gaps:80/503 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SRQEFLDTESAKMDLMQLDVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKGREEEYLGNP 77
            :.|||..:......|...:..|:|....|.:..:|...::|.|...|:....|.....||.:.:|
Zfish    19 TEQEFFSSVDQVSQLFNEEENLLDTFSLYIDAEEENLKKMKSLLLLLQLGSFSNPQSPEETMRDP 83

  Fly    78 LHSFPLIRHMYQDWRYLEEFMKKPVGEEEIQFLRRKL-PELPWQVDTEEASVSIFRIAETYGMMP 141
            :.:|.|::.:..:|..:.:|.::.:.:|....|...| |||.   |...|::.:..:.|.|.:.|
Zfish    84 VAAFKLLKRLRHEWVNIAKFTQQSLYQEFQTLLDYSLIPELE---DINSAALGLIGLQEIYKLYP 145

  Fly   142 WDMANGLIDNVRFNSTLPALDCFEVAKMYFKWGYFKQALQWITISKARM-------KEEY----- 194
                    .|:...:.|.|.:.:.:..:.::...|:.|..|...|..|:       |.:.     
Zfish   146 --------HNITKETPLSADEAYYIGLVAYEEDKFQHAFLWFLHSLNRLTDFSSTTKNDLLRFLS 202

  Fly   195 SGVYEVLGMNRQDVALLQARCLVELDRRDEAHEVLL-----------DQPDLADNSISLLDQFKA 248
            |..|:   .....||:...:.|:.||..:|..:|.|           ..||     |..|:....
Zfish   203 SSAYQ---FGSLPVAIYFGQKLLNLDPSNEEIKVQLGLYRLIRLQRTSNPD-----IFTLNTQSN 259

  Fly   249 NPYEAIDSSPKLGEGYKRLCRSSFSPNPSK----LHCRYNS-TTSAFLILAPLKMEEISLEPHIV 308
            |.|||             |||.......||    |.|||:: ..:..|:.||:|.||:..||.|:
Zfish   260 NSYEA-------------LCRGEVDERTSKRQRALSCRYSTGGGNPRLMYAPVKEEELWDEPKII 311

  Fly   309 VYHDILPDKDIQQLITLAEPLLKPTE----MFDDNKNEARSSYRTPLGGPLLDSLTQRMRDITGL 369
            .|||::.|.:|:.|..:|.|.|..::    :..|.:. ::|.:...:|  .:..::||:.|||||
Zfish   312 RYHDVISDTEIETLKDIARPELTRSQTGWGVISDIRT-SQSVFLEEVG--TVARISQRIADITGL 373

  Fly   370 QIRQGNPINIIKYGFGAPYTNYYDFFKKRNSESKGFGDRMATFMFYLNDAPYGGATVFPRLNVKV 434
            .:.....:::..||.|..||.::|...:.|       :|.|||:.|::|...||||||..:.|.|
Zfish   374 SVESAEKLHVQNYGIGGRYTPHFDTGDEVN-------ERTATFLIYMSDVEVGGATVFTNVGVAV 431

  Fly   435 PAERGKVLFWYNL--NGDTHDMEPTTMHAACPVFHGSKWVMTAWIHEY 480
            ..|:|..:|||||  ||   :::..|.||.|||..|:|||...||||:
Zfish   432 KPEKGSAVFWYNLHKNG---ELDLKTKHAGCPVLVGNKWVANKWIHEF 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 27/124 (22%)
P4Hc 316..478 CDD:214780 57/167 (34%)
zgc:152670NP_001070123.2 P4Ha_N 26..150 CDD:285528 28/134 (21%)
P4Hc 318..474 CDD:214780 57/168 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1438683at2759
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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