DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE3 and p4ha2

DIOPT Version :9

Sequence 1:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:516 Identity:145/516 - (28%)
Similarity:239/516 - (46%) Gaps:57/516 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 WESRQEFLDTESAKMDLMQLDVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKGREEEYLG 75
            ||.:.|...:.....||:..:.:|:.:|..|..:.:|:.|::||.|.|:.:....:....|.|||
 Frog    17 WEVQTEVFTSTGQMTDLIFRERDLLQSLKEYIREEEERLSKIKRWASEVDELSSRSTADPEGYLG 81

  Fly    76 NPLHSFPLIRHMYQDWRYLEEFMKKPVGEEEIQFLRRKLPELPWQVDTEEASVSIFRIAETYGMM 140
            :|::::.|::....||..||..:.:...:..|.....:....|.:.|...|:.::.||.:||.:.
 Frog    82 HPVNAYKLVKRFNTDWSSLENLVLQDSAKGFIANFTFQREYFPTEEDETGAARALMRIQDTYKLD 146

  Fly   141 PWDMANGLIDNVRFNSTLPALDCFEVAKMYFKWGYFKQALQWITISKARMKEEYSGVYEVLGMNR 205
            |..:|.|.:....:.|:|.|.|.|.:.|:.:..|.:...:.|:..:..:|.|....|     :|:
 Frog   147 PDVIAKGKLPGTNYISSLSADDSFGMGKIAYHDGDYYHTVLWMQQALKQMDEGEDAV-----VNK 206

  Fly   206 QDV----------------ALLQARCLVELD-RRDEAHEVLLDQPDLADNSISLLDQFKANPYEA 253
            .||                ||...:.|:.|| ..|.|...|.....:.:...:.|.|.::...|:
 Frog   207 VDVLDYLSYTVFQLGDVPRALELTKRLLALDPNHDRAVNNLKYFEKMQEKQKAELKQNESTNTES 271

  Fly   254 IDSSPKL----------GEGYKRLCR-SSFSPNP---SKLHCRY-NSTTSAFLILAPLKMEEISL 303
            ....|.:          .:.|:.||| .....||   .:|.||| |...|.:|||:|:|:|:...
 Frog   272 ATRQPGVYSRPLDYLPERDVYEALCRGEGVKMNPRRQRRLFCRYHNGNRSPYLILSPVKVEDEWD 336

  Fly   304 EPHIVVYHDILPDKDIQQLITLAEPLLKPTEMFDD--------NKNEARSSYRTPLGGPLLDSLT 360
            .|.||.|.:.|.|::|.::..||:|.|....:.|.        |...::|::......|::..:.
 Frog   337 SPRIVRYLNALSDEEIAKIKELAKPKLARATVRDPKTGVLSVANYRVSKSAWLEENDDPVIARVN 401

  Fly   361 QRMRDITGLQIRQGNPINIIKYGFGAPYTNYYDFFKKRNSE---SKGFGDRMATFMFYLNDAPYG 422
            .||:.||||.:.....:.:..||.|..|..::||.:|...:   ..|.|:|:|||:.|::|...|
 Frog   402 LRMQAITGLTVDTAELLQVANYGMGGQYEPHFDFSRKDEPDVFKRLGTGNRVATFLNYMSDVEAG 466

  Fly   423 GATVFPRLNVKVPAERGKVLFWYNL----NGDTHDMEPTTMHAACPVFHGSKWVMTAWIHE 479
            ||||||.....:..::|..:|||||    .||..     |.||||||..|||||...|.||
 Frog   467 GATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYR-----TRHAACPVLVGSKWVSNKWFHE 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 32/123 (26%)
P4Hc 316..478 CDD:214780 59/176 (34%)
p4ha2XP_012814344.2 P4Ha_N 27..113 CDD:400573 21/85 (25%)
TPR repeat 166..201 CDD:276809 8/34 (24%)
TPR repeat 206..236 CDD:276809 5/29 (17%)
P4Hc 348..521 CDD:214780 59/177 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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