DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE3 and PH4alphaNE1

DIOPT Version :9

Sequence 1:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster


Alignment Length:493 Identity:144/493 - (29%)
Similarity:228/493 - (46%) Gaps:51/493 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DLMQLDVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKGREEEYLGNPLHSFPLIRHMYQD 90
            ||:..:..|...|.:....|.....||:.....:.:....|....|.||.||::.:.|::.::.|
  Fly    32 DLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKEHTMAASDTENYLTNPVNVYRLMKRLHTD 96

  Fly    91 WRYLEEFMKKPVGEEEIQFLRRKLPELPWQVDTEEASVSIFRIAETYGMMPWDMANGLIDNVRFN 155
            |..:|..::....|......|......|.|.|.|.|::::.|:..||.:....:|.|:::.|::.
  Fly    97 WSLMEGRVQLMAEEMNFNATREYGLSYPSQEDVEGAALALVRLQSTYKLDVAQVAQGILNGVKYG 161

  Fly   156 STLPALDCFEVAKMYFKWGYFKQALQWITISKARMKEEYSGV---------YEVLGMNRQDVALL 211
            |.:...||||:.:..|:...:.....|:..|..|::.:.|..         .:.:.:|:.:..  
  Fly   162 SDMSWQDCFELGQQLFEMEDYNNTKVWLRESMERLRRQTSHAPSHLAPTSGPDTVTLNKMEAT-- 224

  Fly   212 QARCLVELDRRDEAHE----VLLDQPDLADNSISLLDQFKANPYEAIDS--SPKLGEG------- 263
             |:.|.:|...|.|.|    ||...|....| ..|.|:..|.| |.||.  .||..:.       
  Fly   225 -AKSLFQLGDFDTAFELSQRVLQFDPKRIRN-WHLGDKGTAPP-EDIDDVYLPKHSDSYSLSQEF 286

  Fly   264 --YKRLCRSSFSP-NPSKLHCRYNSTTSAFLILAPLKMEEISLEPHIVVYHDILPDKDIQQLITL 325
              |:::||....| ...:|.|||:.....:..|||||:||.||:|::..:||||....|.||..:
  Fly   287 AKYEKVCRGEVHPIVRQELRCRYSRGNHPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREM 351

  Fly   326 AEPLLKPTEM------------FDDNKNE--ARSSYRTPLGGPLLDSLTQRMRDITGLQIRQGNP 376
            |.|.:..:.:            |..:||.  |..|:.|.:|      :.:.::|.|||.......
  Fly   352 AVPRMHRSTVNPLPGGQLKKSAFRVSKNAWLAYESHPTMVG------MLRDLKDATGLDTTFCEQ 410

  Fly   377 INIIKYGFGAPYTNYYDFFKKRNSESKGFGDRMATFMFYLNDAPYGGATVFPRLNVKVPAERGKV 441
            :.:..||.|..|..::|||:..|......|:|:||.:|||::...||||.||.|::.|..:.|.|
  Fly   411 LQVANYGVGGHYEPHWDFFRDPNHYPAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNV 475

  Fly   442 LFWYNLNGDTHDMEPTTMHAACPVFHGSKWVMTAWIHE 479
            ||||||:... |.:..|.||.|||..||||:...||||
  Fly   476 LFWYNLHRSL-DKDYRTKHAGCPVLKGSKWIGNVWIHE 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 29/122 (24%)
P4Hc 316..478 CDD:214780 59/175 (34%)
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 29/122 (24%)
P4Hc 341..511 CDD:214780 59/176 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461809
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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