DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE3 and PH4alphaMP

DIOPT Version :9

Sequence 1:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster


Alignment Length:508 Identity:140/508 - (27%)
Similarity:234/508 - (46%) Gaps:61/508 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EFLDTESAKMDLMQLDVELIDNLMNYAEKIDEKASQLKRLAQELR-QPLHSAKGREEEYLGNPLH 79
            ||..:.|....|.:.:|.|:..|.||..:|::.|..|:.....:| :.|::|.| .::||.||::
  Fly    20 EFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQSEIDAIRVEHLNAADG-IDDYLNNPVN 83

  Fly    80 SFPLIRHMYQDWRYLEEFMKKPVGEEEIQFLRRKLPE---LPWQVDTEEASVSIFRIAETYGMMP 141
            :|.||:.::.||...|..:...............|.|   .|.|.|...:::::.|:.:||.:..
  Fly    84 AFRLIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENLSFPSQDDFVGSAIALTRLQQTYQLDV 148

  Fly   142 WDMANGLIDNVRFNSTLPALDCFEVAKMYFKWGYFKQALQWITISKARMKEEYSGVYEVLGMNRQ 206
            .::|:|:::.|::.:.:...|||.:.:..:....:...:.|:..|...:.|:..|        .:
  Fly   149 AELASGILNGVKYGTAMSWQDCFVLGQHLYALRDYNHTVPWLQQSMQLLGEQSYG--------SE 205

  Fly   207 DVALLQARCLVELDRRDEAHE--------VLLDQPDLADNSISLLDQFKANPYEAIDSSPKLG-- 261
            ..:|.....:||..|...|||        ||..:||...:.:....|.:    |.|....|.|  
  Fly   206 SASLDFMEAVVEYHREMGAHESALSLVNHVLSIEPDQRSHLLEARQQLE----ELITDGDKNGLL 266

  Fly   262 ----------------EGYKRLCRSSFSPNPSK---LHCRYNSTTSAFLILAPLKMEEISLEPHI 307
                            ..|:::||...:|.|||   |.||...:...:   ||.|:||:.|:|.:
  Fly   267 HLTARRPGDYHESREFRMYEQVCRGELAPLPSKQRNLRCRLRKSRLGY---APFKLEELHLDPLV 328

  Fly   308 VVYHDILPDKDIQQLITLAEPLLKPTEMFD--DNKNEARSSYRTPLGGPLLDS-------LTQRM 363
            |..|.::..||...|...|.|.:|.:.::.  .|.....:::||..|.....|       |::.:
  Fly   329 VQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAAFRTSQGASFNYSRNAATKLLSRHV 393

  Fly   364 RDITGLQIRQGNPINIIKYGFGAPYTNYYDFFKKRNSESKG--FGDRMATFMFYLNDAPYGGATV 426
            .|.:||.:.....:.:..||.|..|..::|.|.:.:...:|  .|:||||.::||.|...||.|.
  Fly   394 GDFSGLNMDYAEDLQVANYGIGGHYEPHWDSFPENHIYQEGDLHGNRMATGIYYLADVEAGGGTA 458

  Fly   427 FPRLNVKVPAERGKVLFWYNLNGDTHDMEPTTMHAACPVFHGSKWVMTAWIHE 479
            ||.|.:.|..|||.:||||||: .:.|.:..|.||||||..||||:...||.|
  Fly   459 FPFLPLLVTPERGSLLFWYNLH-PSGDQDFRTKHAACPVLQGSKWIANVWIRE 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 33/127 (26%)
P4Hc 316..478 CDD:214780 59/172 (34%)
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 34/132 (26%)
P4Hc 336..509 CDD:214780 59/173 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461832
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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