DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE3 and PH4alphaEFB

DIOPT Version :9

Sequence 1:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster


Alignment Length:514 Identity:145/514 - (28%)
Similarity:247/514 - (48%) Gaps:65/514 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QEFLDTESAKMDLMQLDVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKGREEEYLGNPLH 79
            :|.|:|||.          ||.||..|....::|.:.||....|.::....|......|:.||::
  Fly    33 EELLETESV----------LITNLEGYIRVQEDKLNFLKNKMDEYQREHSDASHDITAYVSNPIN 87

  Fly    80 SFPLIRHMYQDWRYLEEFMKKPVGEEEIQFLR--RKLPELPWQVDTEEASVSIFRIAETYGMMPW 142
            ::.|.:.:..|||.:|..|:..||.:.:|.:.  |.|.:.|...|...|:|::.|:.:||.:...
  Fly    88 AYLLTKRLTTDWRQVENLMEHDVGTDFLQNITQYRSLLKFPSDEDLNGAAVALLRLQDTYQLDTS 152

  Fly   143 DMANGLIDNVRFNSTLPALDCFEVAKM-YFKWGYFKQALQWITISKARMKEE---------YSGV 197
            .:|.|.::.:::::.:.:.||||:.:. |....|:...| |:..:.|||.||         .:.:
  Fly   153 SVARGKLNGIQYSTEMSSDDCFELGRQSYVNHDYYHTVL-WMNEAMARMLEEPTNHTQSFTKADI 216

  Fly   198 YEVLGMNRQ-----DVALLQARCLVEL----DR---------RDEAHEVLLDQPDLADNSISLLD 244
            .|.|..:..     :.||.....|::|    :|         ::.|.::.|.:....|.:    |
  Fly   217 LEYLAFSTYKEGNIESALTMTNELLQLLPHHERANGNKRFYEKEIAQQLQLRKMKGDDGT----D 277

  Fly   245 QFKANPYEAIDSSPKLGE-----GYKRLCRSSFSPNPS---KLHCRYNSTTSAFLILAPLKMEEI 301
            :...:......|.|.:.:     .|:.|||....|:||   .|.|||.:....||.|.|||:||:
  Fly   278 EMPKSDLPVAKSDPAIFDMTERRAYEMLCRGELKPSPSDLRSLRCRYVTNRVPFLRLGPLKLEEV 342

  Fly   302 SLEPHIVVYHDILPDKDIQQLITLAEPLLKPTEMFDD--------NKNEARSSYRTPLGGPLLDS 358
            ..:|:||:|||.:.|.:|..:..:|.|..:...:.:.        |...::|::.......::::
  Fly   343 HADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGALETANYRISKSAWLKTQEDRVIET 407

  Fly   359 LTQRMRDITGLQIRQGNPINIIKYGFGAPYTNYYDFFKK---RNSESKGFGDRMATFMFYLNDAP 420
            :.||..|:|||.:.....:.::.||.|..|..::||.:|   |..|....|:|:||.:||::|..
  Fly   408 VVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARKEEQRAFEGLNLGNRIATVLFYMSDVE 472

  Fly   421 YGGATVFPRLNVKVPAERGKVLFWYNLNGDTHDMEPTTMHAACPVFHGSKWVMTAWIHE 479
            .||||||..|:..:..::|...||.||:.|... :..|.||||||..|:|||...||||
  Fly   473 QGGATVFTSLHTALFPKKGTAAFWMNLHRDGQG-DVRTRHAACPVLTGTKWVSNKWIHE 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 33/125 (26%)
P4Hc 316..478 CDD:214780 53/172 (31%)
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 38/135 (28%)
P4Hc 356..529 CDD:214780 53/173 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461817
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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