DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE3 and p4ha2

DIOPT Version :9

Sequence 1:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster
Sequence 2:XP_005173949.1 Gene:p4ha2 / 373132 ZFINID:ZDB-GENE-030827-1 Length:542 Species:Danio rerio


Alignment Length:551 Identity:150/551 - (27%)
Similarity:247/551 - (44%) Gaps:111/551 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 STLNWES--RQEFLDTESAKMDLMQLDVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKGR 69
            |||::.|  |.|...:.....:|:..:.||:.:|..|.:..::|...::..|.:|.:...::...
Zfish    10 STLSFSSPTRAEIFTSIGQMTNLIFTERELVQSLKEYIQAEEQKLETVRSWANKLDKLTRTSTSD 74

  Fly    70 EEEYLGNPLHSFPLIRHMYQDWRYLEEFMKKPVGEEEIQFLRRKLPELPWQVDTEEASVSIFRIA 134
            .|.:|.:|::::.|::.:..:|..||..:.:...:..|..:.......|.:.|.:.|:.::.|:.
Zfish    75 PEGFLAHPVNAYKLMKRLNTEWSELESLVLQDPSDGFISNMSVHRQYFPDEEDEKGAAKALLRLQ 139

  Fly   135 ETYGMMPWDMANGLI------DNVRFNSTLPALDCFEVAKMYFKWGYFKQALQWITISKARMK-- 191
            :||.:.....:.|.:      ..||:|:.|...|||::.||.:....:..::.|:..|..:|.  
Zfish   140 DTYKLDAESFSKGKLPGQRQHSGVRYNALLTVDDCFDMGKMAYNDNDYYHSVLWMQQSLRQMDSG 204

  Fly   192 EE-------------YSGVYEVLGMNRQDVALLQARCLVELDRR----DEAH----------EVL 229
            ||             || ||::..:.|          .:||.||    |.:|          |.|
Zfish   205 EEAKTPKADVLDYLSYS-VYQMGDLPR----------AIELTRRLLAIDPSHQRAGGNLRYFERL 258

  Fly   230 LD---------QPDLADNSISLLDQFKANPYEAIDSSPKLGEGYKRLCRSS----FSPNPSKLHC 281
            |.         ||:.||.....||.:: .|.:.:...    |.|:.|||..    .:...|:|.|
Zfish   259 LSKELQDSGQTQPEPADERPIQLDTYQ-RPKDYLPER----EAYEALCRGEGVKMTTKRQSRLFC 318

  Fly   282 RY-NSTTSAFLILAPLKMEEISLEPHIVVYHDILPDKDIQQLITLAEPLLKPTEMFDDNKNEARS 345
            || :...:..|:|.|:|.|:....||||.:.:.|.|::||::..:|.|.|            ||:
Zfish   319 RYRDGNRNPRLLLKPMKEEDEWDSPHIVRFLEALSDEEIQKIKEIATPKL------------ARA 371

  Fly   346 SYRTPLGG--------------------PLLDSLTQRMRDITGLQIRQGNPINIIKYGFGAPYTN 390
            :.|.|..|                    |::..:.||:.|||||.:.....:.:..||.|..|..
Zfish   372 TVRDPKTGVLTVAHYRVSKSAWLEGEDDPVIARVNQRIEDITGLTVDTAELLQVANYGVGGQYEP 436

  Fly   391 YYDFFKKRNSE---SKGFGDRMATFMFYLNDAPYGGATVFPRLNVKVPAERGKVLFWYNL----N 448
            ::||.:|...:   |.|.|:|:||::.|::|...|||||||.....|...:|..:|||||    .
Zfish   437 HFDFSRKDEPDAFKSLGTGNRVATYLNYMSDVEAGGATVFPDFGASVWPRKGTAVFWYNLFRSGE 501

  Fly   449 GDTHDMEPTTMHAACPVFHGSKWVMTAWIHE 479
            ||..     |.||||||..|||||...||||
Zfish   502 GDYR-----TRHAACPVLVGSKWVSNKWIHE 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 23/123 (19%)
P4Hc 316..478 CDD:214780 63/188 (34%)
p4ha2XP_005173949.1 P4Ha_N 25..154 CDD:285528 23/128 (18%)
P4Hc 353..526 CDD:214780 63/189 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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