DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE3 and P4ha2

DIOPT Version :9

Sequence 1:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001101745.1 Gene:P4ha2 / 360526 RGDID:1309673 Length:535 Species:Rattus norvegicus


Alignment Length:540 Identity:144/540 - (26%)
Similarity:246/540 - (45%) Gaps:104/540 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LNWESRQEFLDTESAKMDLMQLDVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKGREEEY 73
            |:| .:.||..:.....||:..:.:|:.:|..|....:.|.|::|..|.::......:....|.|
  Rat    16 LSW-VQAEFFTSIGHMTDLIYAEKDLVQSLKEYILAEEAKLSKIKSWASKMEALTSKSAADPEGY 79

  Fly    74 LGNPLHSFPLIRHMYQDWRYLEEFMKKPVGEEEIQFLRRKLPELPWQVDTEEASVSIFRIAETYG 138
            |.:|::::.|::.:..||..|.:.:.:......:..|..:....|...|...|:.::.|:.:||.
  Rat    80 LAHPVNAYKLVKRLNTDWPALGDLVLQDAAAGFVANLSVQRQFFPTDEDESGAARALMRLQDTYK 144

  Fly   139 MMPWDMANGLIDNVRFNSTLPALDCFEVAKMYFKWGYFKQALQWI-------------TISKARM 190
            :.|..::.|.:...::.:.|...|||.:.:..:..|.:...:.|:             |::|:.:
  Rat   145 LDPDMISRGELPGTKYQAMLSVDDCFGMGRSAYNEGDYYHTVLWMEQVLKQLDAGEEATVTKSLV 209

  Fly   191 KEEYS-GVYEVLGMNRQDVALLQARCLVELDRR----DEAH----------EVLLDQPDLADNSI 240
            .:..| .|:::..::|          .|||.||    |.:|          |.||::    :...
  Rat   210 LDYLSYAVFQLGDLHR----------AVELTRRLLSLDPSHERAGGNLRYFERLLEE----ERGK 260

  Fly   241 SLLDQFKA------NPYE-AIDSSPKLGEGYKRLCRS---SFSPNPSK-LHCRY-NSTTSAFLIL 293
            ||.:|..|      |.|| .:|..|: .:.|:.|||.   ..:|...| |.||| :......|::
  Rat   261 SLSNQTDAGLASQENLYERPVDYLPE-RDVYESLCRGEGIKMTPRRQKRLFCRYHHGNRVPQLLI 324

  Fly   294 APLKMEEISLEPHIVVYHDILPDKDIQQLITLAEPLLKPTEMFDDNKNEARSSYRTPLGG----- 353
            ||.|.|:....||||.|:|::.|::|:::..:|:|.|            ||::.|.|..|     
  Rat   325 APFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKL------------ARATVRDPKTGVLTVA 377

  Fly   354 ---------------PLLDSLTQRMRDITGLQIRQGNPINIIKYGFGAPYTNYYDFFKKRNSESK 403
                           |::..:.:||:.||||.::....:.:..||.|..|..::||  .|:.|..
  Rat   378 SYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDF--SRSDERD 440

  Fly   404 GF-----GDRMATFMFYLNDAPYGGATVFPRLNVKVPAERGKVLFWYNL----NGDTHDMEPTTM 459
            .|     |:|:|||:.|::|...|||||||.|...:..::|..:|||||    .||..     |.
  Rat   441 AFKRLGTGNRVATFLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYR-----TR 500

  Fly   460 HAACPVFHGSKWVMTAWIHE 479
            ||||||..|.|||...|.||
  Rat   501 HAACPVLVGCKWVSNKWFHE 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 26/123 (21%)
P4Hc 316..478 CDD:214780 61/190 (32%)
P4ha2NP_001101745.1 P4Ha_N 27..104 CDD:400573 17/76 (22%)
P4Hc 346..519 CDD:214780 61/191 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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