DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE3 and phy-3

DIOPT Version :9

Sequence 1:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_507251.2 Gene:phy-3 / 188624 WormBaseID:WBGene00004026 Length:318 Species:Caenorhabditis elegans


Alignment Length:300 Identity:75/300 - (25%)
Similarity:120/300 - (40%) Gaps:44/300 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 EVLGMNRQDVALLQARCLVELDRRDEAHEVLLDQPDLADNSISLLDQ--FKANPYEAIDSSPKLG 261
            ::||:    |:||.|..|....|    |..||.|.|..:...:.|.:  :..:..|..|...|..
 Worm     8 QILGL----VSLLCATWLYSQCR----HIWLLAQDDFNEQFTNFLGEKWWSTDQLELCDDETKDT 64

  Fly   262 EGYKR--LCRSSFSPNPSKLHCRYNSTTSAFLILAPLKMEEISLEPHIVVYHDILPDKDIQQLIT 324
            :..|.  :|          :...||        :.|:.||.||..|.:|:|.:::..:.....:.
 Worm    65 KWQKNDSIC----------ITYVYN--------MLPVDMEIISWAPTLVIYRNLMSPRQTASFLN 111

  Fly   325 LAEPLLKPTEMFDDNKNEARSSYRTPLGG--PLLDS------LTQRMRDITGLQIRQGNPINIIK 381
            ..|......:...|......:::|...|.  |..||      ..|..:.|.||.:......:.:.
 Worm   112 FIEQRDLEIQKTSDFGTSIETTHRRANGSFIPPEDSNVTVEIKMQAQKRIPGLNLTVAEHFSALS 176

  Fly   382 YGFGAPYTNYYDFFKKRNSESKGF-----GDRMATFMFYLNDAPYGGATVFPRLNVKVPAERGKV 441
            |..|..|..:||:...|:.:...:     |:|:.|.:|.|..|..||.||||.:...|.|..|..
 Worm   177 YLPGGHYAVHYDYLDYRSKQDYDWWMNKTGNRIGTLIFVLKPAEKGGGTVFPSIGSTVRANAGDA 241

  Fly   442 LFWYNLNGDTHDMEPTTMHAACPVFHGSKWVMTAWIHEYD 481
            .||:|...| .:.|..:.|..||::.|.|.:.|.||..|:
 Worm   242 FFWFNAQAD-EEKEMLSNHGGCPIYEGRKVIATIWIRAYN 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528
P4Hc 316..478 CDD:214780 44/174 (25%)
phy-3NP_507251.2 P4Hc 102..277 CDD:214780 44/175 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1438683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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