DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE3 and phy-2

DIOPT Version :9

Sequence 1:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_502317.1 Gene:phy-2 / 178170 WormBaseID:WBGene00004025 Length:539 Species:Caenorhabditis elegans


Alignment Length:513 Identity:139/513 - (27%)
Similarity:233/513 - (45%) Gaps:72/513 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DTESAKMDLMQL-----DVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKGREEEYLGNPL 78
            |..:|..||..:     ||..|  :..|.|....:...|:|.|.|.......|:....|::.||:
 Worm    17 DLFTAIADLQHMLGAEKDVTTI--IDQYIEAERARLDDLRRYAHEYVHRNAHAESVGPEFVTNPI 79

  Fly    79 HSFPLIRHMYQDWRYLEEFMKKPVGEEEIQFLR-------RKLPELPWQVDTEEASVSIFRIAET 136
            :::.||:.:..:|:.:|..|   :..:...||:       |...:.|.:.|...|:.::.|:.:|
 Worm    80 NAYLLIKRLTTEWKKVENIM---LNNKASTFLKNITDNRVRSEVKFPGEEDLSGAATALLRLQDT 141

  Fly   137 YGMMPWDMANGLIDNVRFNSTLPALDCFEVAKMYFKWGYFKQALQWITISKARMKEE-------- 193
            |.:...|::||:|...:.::.|...|.|||.:..:....:...|.|:.::..:::.|        
 Worm   142 YSLDTLDLSNGIIGGEKVSNKLSGHDTFEVGRSAYNQKDYYHCLMWMQVALVKIENENPPTIEEW 206

  Fly   194 -------YSGVYEVLGMNRQDVALLQARCLVELDRRD-------EAHEVLLDQPDLADNSISLLD 244
                   || :|:...:.|   ||...:.|.::....       :.:|.:|...|:..:...:::
 Worm   207 EILEYLAYS-LYQQGNVRR---ALSLTKRLAKIAPNHPRAKGNVKWYEDMLQGKDMVGDLPPIVN 267

  Fly   245 QFKANPYEAIDSSPKLGEGYKRLCRSSFSP-NP---SKLHCRYNSTTSAFLILAPLKMEEISLEP 305
              |...|:.|...    :.|:.|||....| .|   :||.| |......||.|||:|:|.:..:|
 Worm   268 --KRVEYDGIVER----DAYEALCRGEIPPVEPKWKNKLRC-YLKRDKPFLKLAPIKVEILRFDP 325

  Fly   306 HIVVYHDILPDKDIQQLITLAEPLLKPTEMFDDNKNE-ARSSYRTP----LGG---PLLDSLTQR 362
            ..|::.:::.|.:|:.:..||.|.||...:.:....| ..::||..    |.|   |::|.:.:|
 Worm   326 LAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRR 390

  Fly   363 MRDITGLQIRQGNPINIIKYGFGAPYTNYYDFFKKRNSESKGF-----GDRMATFMFYLNDAPYG 422
            :.|.|.|.......:.:..||.|..|..::||.:|  .|...|     |:|:||.:||::....|
 Worm   391 IEDFTNLNQATSEELQVANYGLGGHYDPHFDFARK--EEKNAFKTLNTGNRIATVLFYMSQPERG 453

  Fly   423 GATVFPRLNVKVPAERGKVLFWYNLNGDTH-DMEPTTMHAACPVFHGSKWVMTAWIHE 479
            |||||..|...|...:...||||||..|.. |:.  |.||||||..|.|||...||||
 Worm   454 GATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLR--TRHAACPVLLGVKWVSNKWIHE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 32/135 (24%)
P4Hc 316..478 CDD:214780 61/175 (35%)
phy-2NP_502317.1 P4Ha_N 21..154 CDD:285528 33/137 (24%)
TPR_16 169..240 CDD:290168 13/74 (18%)
P4Hc 335..508 CDD:214780 61/176 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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