DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaNE3 and dpy-18

DIOPT Version :9

Sequence 1:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_499464.1 Gene:dpy-18 / 176569 WormBaseID:WBGene00001077 Length:559 Species:Caenorhabditis elegans


Alignment Length:514 Identity:134/514 - (26%)
Similarity:230/514 - (44%) Gaps:71/514 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LDTESAKM-DLMQLDVELIDNLMNYAEKIDEKASQLKRLAQEL--RQPLHSAKGREEEYLGNPLH 79
            |.|..|.| :|::.:..:...|..|....:|:..|||:|::|.  :..:....|.::  :.||::
 Worm    18 LFTSIADMQNLLETERNIPKILDKYIHDEEERLVQLKKLSEEYSKKNEISIENGLKD--ITNPIN 80

  Fly    80 SFPLIRHMYQDWRYLEEFMKKPVGEEEIQFLRRKL--PELPWQVDTEEASVSIFRIAETYGMMPW 142
            :|.||:....||:.:|..|........:..:....  ...|...|...|::.:.|:.:||.:...
 Worm    81 AFLLIKRKIFDWKEIESKMNANKAGNVVSSITDDSYGVRYPTADDLSGAAIGLLRLQDTYRLDTK 145

  Fly   143 DMANGLIDNVRFNSTLPALDCFEVAKMYFKWGYFKQALQWITISKARMKEEYSGVYEV------- 200
            |:|:|.|...:.|.|..|.||||:|:..:....|...:.|:..::.|:.:|.....||       
 Worm   146 DLADGKIYADQGNYTFSAKDCFEIARAAYNEHDFYHTVMWMEEAQRRLGDEVEPTVEVEDILEYL 210

  Fly   201 -LGMNRQDVALLQARCLVELDRRDEAH----------EVLLDQPDLADNSI-------------S 241
             ..:.:|:......:...||.:.:..|          |.||:|..:..:.:             |
 Worm   211 AFALYKQNNLKHALKLTEELYKMNPTHPRAKGNVKWYEDLLEQEGVRRSDMRKNLPPIQNRRPDS 275

  Fly   242 LLDQFKANPYEAIDSSPKLGEGYKRLCRSSF---SPNPSKLHCRYNSTTSAFLILAPLKMEEISL 303
            :|...:...|||             |||:..   ..:.|:|:| |......||:.||:|:|....
 Worm   276 VLGNTERTMYEA-------------LCRNEVPVSQKDISRLYC-YYKRDRPFLVYAPIKVEIKRF 326

  Fly   304 EPHIVVYHDILPDKDIQQLITLAEPLLKPTEMFDDNKNE--------ARSSYRTPLGGPLLDSLT 360
            .|..|::.|::.|.::..:..||:|.|....:.|....:        ::|::.....|.:::::.
 Worm   327 NPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETVN 391

  Fly   361 QRMRDITGLQIRQGNPINIIKYGFGAPYTNYYDFFKKRNS---ESKGFGDRMATFMFYLNDAPYG 422
            :|:..:|.|::.....:.|..||.|..|..::|..||..|   ||.|.|:|:||.:||::...:|
 Worm   392 KRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMSQPSHG 456

  Fly   423 GATVFPRLNVKVPAERGKVLFWYNL--NGDTHDMEPTTMHAACPVFHGSKWVMTAWIHE 479
            |.|||......:...:...||||||  .||.:   |.|.||||||..|.|||...||||
 Worm   457 GGTVFTEAKSTILPTKNDALFWYNLYKQGDGN---PDTRHAACPVLVGIKWVSNKWIHE 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 29/128 (23%)
P4Hc 316..478 CDD:214780 55/174 (32%)
dpy-18NP_499464.1 P4Ha_N 21..152 CDD:285528 30/132 (23%)
P4Hc 338..511 CDD:214780 55/175 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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