DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31016 and P4H2

DIOPT Version :9

Sequence 1:NP_001263119.1 Gene:CG31016 / 326113 FlyBaseID:FBgn0051016 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_566279.1 Gene:P4H2 / 819804 AraportID:AT3G06300 Length:299 Species:Arabidopsis thaliana


Alignment Length:227 Identity:68/227 - (29%)
Similarity:114/227 - (50%) Gaps:28/227 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 ITTPFLKLAPFRMEELSLDPYVIFYHNVLSDAEIEKLKPMGKPFLERAKVFRVEKGSDEIDPSRS 368
            |::|...:.|.:::::|..|....|...|:|.|.:.|..:.|..|:|:.|...:.|..::...|:
plant    26 ISSPSSIINPSKVKQVSSKPRAFVYEGFLTDLECDHLISLAKENLQRSAVADNDNGESQVSDVRT 90

  Fly   369 ADGAWLPHQNIDPDDLEVLNRIGRRIEDMTGLNTRSGSKMQFLKYGFGGHFVPHYDYFNSKTFSL 433
            :.|.:: .:..||    :::.|..::...|.|...:|..:|.|:|..|..:..|:|||:.|. ::
plant    91 SSGTFI-SKGKDP----IVSGIEDKLSTWTFLPKENGEDLQVLRYEHGQKYDAHFDYFHDKV-NI 149

  Fly   434 ETVGDRIATVLFYLNNVDHGGATVFP---------------------KLNLAVPTQKGSALFWHN 477
            ...|.||||||.||:||..||.||||                     |..:||..:||:||.:.|
plant   150 ARGGHRIATVLLYLSNVTKGGETVFPDAQEFSRRSLSENKDDLSDCAKKGIAVKPKKGNALLFFN 214

  Fly   478 IDRKSYDYDTRTFHGACPLISGTKLVMTRWIY 509
            :.:.:.. |..:.||.||:|.|.|...|:||:
plant   215 LQQDAIP-DPFSLHGGCPVIEGEKWSATKWIH 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31016NP_001263119.1 P4Ha_N 31..160 CDD:285528
P4Hc 333..508 CDD:214780 59/195 (30%)
P4H2NP_566279.1 P4Hc 55..245 CDD:214780 60/196 (31%)
ShKT 259..299 CDD:214586
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.920

Return to query results.
Submit another query.