DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31016 and p4ha1a

DIOPT Version :9

Sequence 1:NP_001263119.1 Gene:CG31016 / 326113 FlyBaseID:FBgn0051016 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_009304776.1 Gene:p4ha1a / 562774 ZFINID:ZDB-GENE-040724-91 Length:541 Species:Danio rerio


Alignment Length:536 Identity:154/536 - (28%)
Similarity:251/536 - (46%) Gaps:63/536 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NYVISVEEKMDLLEKDRELIIVLDSYATELNEKIIMLKRIVKEFKQPLEKAKNREEEYLSNPIDS 91
            ::..|:....|||..:::|:..|..|......|:..:|:..::.......|....|.:|.:|:::
Zfish    24 DFFTSIGHMTDLLFTEKDLVTSLKDYIKAEESKLEQVKQWAEKLDALTATAVQDPEGFLGHPVNA 88

  Fly    92 LSLMRQMHEDWEKVEKLLKKPVGQEKIALVEKMREDLPVENDLMEANQAMFRILHTYDLEPKDVS 156
            ..||::::.:|.:||.|:.|.:....|:.:...|:..|.:.|...|.:|:.|:..||.|:.:.:|
Zfish    89 FKLMKRLNTEWGEVEDLVLKDMSDGFISNLTIQRQYFPNDEDQNGAAKALLRLQDTYKLDTQTIS 153

  Fly   157 AGWIDGVQ----YGGKMSASDCFTMGTFSFMAGSYQIASKWLSAAKDLLVDQPRKYHEVMGITKA 217
            :|.:.||.    |...::..|||.:|..::....|.....|::.|...|.:......|:  .|..
Zfish   154 SGDLPGVNTGLPYKSTLTVEDCFELGKIAYSDADYYHTELWMAQALKQLDEGEESSVEI--ATAL 216

  Fly   218 DVTLLLARSLIASGNVSIATDMLMR------------------DFMFGEAGSALTVHFLRNKPKP 264
            |   .|:.|:...|.:..|.:...|                  |:...:...|        :.:.
Zfish   217 D---YLSYSVYQQGELERALEYTKRLLTVEPEHQRALGNLKYFDYQLAKQKKA--------EKEQ 270

  Fly   265 SINLESWESDES-------------FNQLCRSSSRRQMGESKPSRLHCRY-NTITTPFLKLAPFR 315
            |...||.:..|:             :.:|||....: |...:...|.||| |....||..:.|.:
Zfish   271 STKEESKKEQETSDGKKEYLPEKRKYEKLCRGEGLK-MTPRRQKHLFCRYFNGNRHPFYTIGPVK 334

  Fly   316 MEELSLDPYVIFYHNVLSDAEIEKLKPMGKPFLERAKVFRVEKGSDEIDPSRSADGAWLPHQNID 380
            .|:....|.:|.||.::::.||||:|.:.||.|.||.:.....|..|....|.:..|||...   
Zfish   335 QEDEWDRPRIIRYHEIITEQEIEKIKELSKPRLRRATISNPITGVLETAHYRISKSAWLAAY--- 396

  Fly   381 PDDLEVLNRIGRRIEDMTGLNTRSGSKMQFLKYGFGGHFVPHYDYFNSK----TFSLETVGDRIA 441
              :..|::||.:||||:||||.::..::|...||.||.:.||:| |..|    .|.....|:|||
Zfish   397 --EHPVVDRINQRIEDITGLNVKTAEELQVANYGVGGQYEPHFD-FGRKDEPDAFKELGTGNRIA 458

  Fly   442 TVLFYLNNVDHGGATVFPKLNLAVPTQKGSALFWHNI-DRKSYDYDTRTFHGACPLISGTKLVMT 505
            |.|||:::|..|||||||::..||...||:|:||:|: .....||.||  |.|||::.|.|.|..
Zfish   459 TWLFYMSDVAAGGATVFPEVGAAVKPLKGTAVFWYNLFPSGEGDYSTR--HAACPVLVGNKWVSN 521

  Fly   506 RWIYELDQMFLIPAVL 521
            :||:|..|.|..|..|
Zfish   522 KWIHERGQEFRRPCGL 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31016NP_001263119.1 P4Ha_N 31..160 CDD:285528 32/128 (25%)
P4Hc 333..508 CDD:214780 73/179 (41%)
p4ha1aXP_009304776.1 P4Ha_N 28..157 CDD:285528 32/128 (25%)
TPR repeat 172..207 CDD:276809 8/34 (24%)
TPR repeat 212..242 CDD:276809 7/34 (21%)
Fis1 218..262 CDD:304536 6/43 (14%)
P4Hc 352..525 CDD:214780 74/180 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583443
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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