DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31016 and p4ha2

DIOPT Version :9

Sequence 1:NP_001263119.1 Gene:CG31016 / 326113 FlyBaseID:FBgn0051016 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_005173949.1 Gene:p4ha2 / 373132 ZFINID:ZDB-GENE-030827-1 Length:542 Species:Danio rerio


Alignment Length:555 Identity:162/555 - (29%)
Similarity:272/555 - (49%) Gaps:59/555 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 AVSFILVLSWIAEGYRDRQNYVISVEEKMDLLEKDRELIIVLDSYATELNEKIIMLKRIVKEFKQ 72
            |...:.:||.::.....|.....|:.:..:|:..:|||:..|..|.....:|:    ..|:.:..
Zfish     2 AAFLVFLLSTLSFSSPTRAEIFTSIGQMTNLIFTERELVQSLKEYIQAEEQKL----ETVRSWAN 62

  Fly    73 PLEK----AKNREEEYLSNPIDSLSLMRQMHEDWEKVEKLLKKPVGQEKIALVEKMREDLPVEND 133
            .|:|    :.:..|.:|::|:::..||::::.:|.::|.|:.:......|:.:...|:..|.|.|
Zfish    63 KLDKLTRTSTSDPEGFLAHPVNAYKLMKRLNTEWSELESLVLQDPSDGFISNMSVHRQYFPDEED 127

  Fly   134 LMEANQAMFRILHTYDLEPKDVSAGWI------DGVQYGGKMSASDCFTMGTFSFMAGSYQIASK 192
            ...|.:|:.|:..||.|:.:..|.|.:      .||:|...::..|||.||..::....|..:..
Zfish   128 EKGAAKALLRLQDTYKLDAESFSKGKLPGQRQHSGVRYNALLTVDDCFDMGKMAYNDNDYYHSVL 192

  Fly   193 WLSAAKDLLVDQPRKYHEVMGITKADVTLLLARSLIASGNVSIATDMLMR----DFMFGEAGSAL 253
            |:..:.     :.....|.....||||...|:.|:...|::..|.::..|    |.....||..|
Zfish   193 WMQQSL-----RQMDSGEEAKTPKADVLDYLSYSVYQMGDLPRAIELTRRLLAIDPSHQRAGGNL 252

  Fly   254 TVHFLR-----------NKPKPS----INLESWE-------SDESFNQLCRSSSRRQMGESKPSR 296
            . :|.|           .:|:|:    |.|::::       ..|::..|||....: |...:.||
Zfish   253 R-YFERLLSKELQDSGQTQPEPADERPIQLDTYQRPKDYLPEREAYEALCRGEGVK-MTTKRQSR 315

  Fly   297 LHCRY-NTITTPFLKLAPFRMEELSLDPYVIFYHNVLSDAEIEKLKPMGKPFLERAKVFRVEKGS 360
            |.||| :....|.|.|.|.:.|:....|:::.:...|||.||:|:|.:..|.|.||.|...:.|.
Zfish   316 LFCRYRDGNRNPRLLLKPMKEEDEWDSPHIVRFLEALSDEEIQKIKEIATPKLARATVRDPKTGV 380

  Fly   361 DEIDPSRSADGAWLPHQNIDPDDLEVLNRIGRRIEDMTGLNTRSGSKMQFLKYGFGGHFVPHYDY 425
            ..:...|.:..|||..:: ||    |:.|:.:||||:|||...:...:|...||.||.:.||:| 
Zfish   381 LTVAHYRVSKSAWLEGED-DP----VIARVNQRIEDITGLTVDTAELLQVANYGVGGQYEPHFD- 439

  Fly   426 FNSK----TFSLETVGDRIATVLFYLNNVDHGGATVFPKLNLAVPTQKGSALFWHNIDRKSYDYD 486
            |:.|    .|.....|:|:||.|.|:::|:.|||||||....:|..:||:|:||:|:.| |.:.|
Zfish   440 FSRKDEPDAFKSLGTGNRVATYLNYMSDVEAGGATVFPDFGASVWPRKGTAVFWYNLFR-SGEGD 503

  Fly   487 TRTFHGACPLISGTKLVMTRWIYELDQMFLIPAVL 521
            .||.|.|||::.|:|.|..:||:|..|.|..|..|
Zfish   504 YRTRHAACPVLVGSKWVSNKWIHERGQEFRRPCGL 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31016NP_001263119.1 P4Ha_N 31..160 CDD:285528 32/132 (24%)
P4Hc 333..508 CDD:214780 71/178 (40%)
p4ha2XP_005173949.1 P4Ha_N 25..154 CDD:285528 32/132 (24%)
P4Hc 353..526 CDD:214780 72/179 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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