DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31016 and PH4alphaNE3

DIOPT Version :9

Sequence 1:NP_001263119.1 Gene:CG31016 / 326113 FlyBaseID:FBgn0051016 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster


Alignment Length:498 Identity:186/498 - (37%)
Similarity:299/498 - (60%) Gaps:25/498 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LSWIAEGYRDRQNYVISVEEKMDLLEKDRELIIVLDSYATELNEKIIMLKRIVKEFKQPLEKAKN 79
            |:|     ..||.::.:...||||::.|.|||..|.:||.:::||...|||:.:|.:|||..||.
  Fly     9 LNW-----ESRQEFLDTESAKMDLMQLDVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKG 68

  Fly    80 REEEYLSNPIDSLSLMRQMHEDWEKVEKLLKKPVGQEKIALVEKMREDLPVENDLMEANQAMFRI 144
            ||||||.||:.|..|:|.|::||..:|:.:|||||:|:|..:.:...:||.:.|..||:.::|||
  Fly    69 REEEYLGNPLHSFPLIRHMYQDWRYLEEFMKKPVGEEEIQFLRRKLPELPWQVDTEEASVSIFRI 133

  Fly   145 LHTYDLEPKDVSAGWIDGVQYGGKMSASDCFTMGTFSFMAGSYQIASKWLSAAKDLLVDQPRKYH 209
            ..||.:.|.|::.|.||.|::...:.|.|||.:....|..|.::.|.:|::.:|..:.::....:
  Fly   134 AETYGMMPWDMANGLIDNVRFNSTLPALDCFEVAKMYFKWGYFKQALQWITISKARMKEEYSGVY 198

  Fly   210 EVMGITKADVTLLLARSLIASGNVSIATDMLMRDFMFGEAGSALTVHFLRNKPKPSINLESWESD 274
            ||:|:.:.||.||.||.|:.......|.::|:......:...:|...|..| |..:|: .|.:..
  Fly   199 EVLGMNRQDVALLQARCLVELDRRDEAHEVLLDQPDLADNSISLLDQFKAN-PYEAID-SSPKLG 261

  Fly   275 ESFNQLCRSSSRRQMGESKPSRLHCRYNTITTPFLKLAPFRMEELSLDPYVIFYHNVLSDAEIEK 339
            |.:.:|||||.     ...||:||||||:.|:.||.|||.:|||:||:|:::.||::|.|.:|::
  Fly   262 EGYKRLCRSSF-----SPNPSKLHCRYNSTTSAFLILAPLKMEEISLEPHIVVYHDILPDKDIQQ 321

  Fly   340 LKPMGKPFLERAKVFRVEKGSDEIDPSRSADGAWLPHQNIDPDDLEVLNRIGRRIEDMTGLNTRS 404
            |..:.:|.|:..::|     .|..:.:||:...        |....:|:.:.:|:.|:|||..|.
  Fly   322 LITLAEPLLKPTEMF-----DDNKNEARSSYRT--------PLGGPLLDSLTQRMRDITGLQIRQ 373

  Fly   405 GSKMQFLKYGFGGHFVPHYDYFNSKTFSLETVGDRIATVLFYLNNVDHGGATVFPKLNLAVPTQK 469
            |:.:..:|||||..:..:||:|..:....:..|||:||.:||||:..:|||||||:||:.||.::
  Fly   374 GNPINIIKYGFGAPYTNYYDFFKKRNSESKGFGDRMATFMFYLNDAPYGGATVFPRLNVKVPAER 438

  Fly   470 GSALFWHNIDRKSYDYDTRTFHGACPLISGTKLVMTRWIYELD 512
            |..|||:|::..::|.:..|.|.|||:..|:|.|||.||:|.|
  Fly   439 GKVLFWYNLNGDTHDMEPTTMHAACPVFHGSKWVMTAWIHEYD 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31016NP_001263119.1 P4Ha_N 31..160 CDD:285528 57/128 (45%)
P4Hc 333..508 CDD:214780 62/174 (36%)
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 56/123 (46%)
P4Hc 316..478 CDD:214780 63/174 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461920
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 1 1.000 - - H94894
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28396
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1211.910

Return to query results.
Submit another query.