DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31016 and p4ha1

DIOPT Version :9

Sequence 1:NP_001263119.1 Gene:CG31016 / 326113 FlyBaseID:FBgn0051016 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_031761963.1 Gene:p4ha1 / 100490484 XenbaseID:XB-GENE-987760 Length:526 Species:Xenopus tropicalis


Alignment Length:526 Identity:156/526 - (29%)
Similarity:257/526 - (48%) Gaps:53/526 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NYVISVEEKMDLLEKDRELIIVLDSYATELNEKIIMLKRIVKEFKQPLEKAKNREEEYLSNPIDS 91
            ::..|:...:|||..:::|:..|..|.....:|:..:|:...:.....:.|....|.||.:|:::
 Frog    19 DFFTSIGHMIDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADKLDHLTDTATKDPEGYLGHPVNA 83

  Fly    92 LSLMRQMHEDWEKVEKLLKKPVGQEKIALVEKMREDLPVENDLMEANQAMFRILHTYDLEPKDVS 156
            ..||::::.:|.|:|.|:.|.:....|:.:...|:..|.:.|...|.:|:.|:..||:|:...:|
 Frog    84 FKLMKRLNTEWVKLENLILKDISDGFISNLTIQRQYFPNDEDQTGAAKALLRLQDTYNLDTDTIS 148

  Fly   157 AGWIDGVQYGGKMSASDCFTMGTFSFMAGSYQIASKWLSAAKDLLVDQPRKYHEVMGITKADVTL 221
            .|.:.||::...::|.|||.:|..::....|.....|:..|...|     ...|...:.|..|..
 Frog   149 KGNLPGVKHKTSLTAEDCFDLGKTAYTDADYYHTELWMEQALSQL-----DAGEESSLDKVMVLD 208

  Fly   222 LLARSLIASGNVSIATDMLMRDFMFG---EAGSALTVHFL------------------RNKPKPS 265
            .|:.::...|::..|..:..|.....   :.|:....|.:                  ..|.:|.
 Frog   209 YLSYAVYQQGDLDKALTLTKRSLELDPEHQRGNGNLRHIMSKESNKSSSSPSEGAELRTRKGRPK 273

  Fly   266 INLESWESDESFNQLCRS-----SSRRQMGESKPSRLHCRY-NTITTPFLKLAPFRMEELSLDPY 324
            .:||.    |.:.:|||.     :||||      .||.||| :....|.|.|:|.:.|:....|.
 Frog   274 DHLEK----EKYEKLCRGEGVKMTSRRQ------KRLFCRYFDGKKDPLLILSPTKQEDEWDKPR 328

  Fly   325 VIFYHNVLSDAEIEKLKPMGKPFLERAKVFRVEKGSDEIDPSRSADGAWLPHQNIDPDDLEVLNR 389
            ::.||:::||.||.|:|.:.||.|.||.:.....|..|....|....|||.... ||    |:.|
 Frog   329 IVRYHDIISDEEISKVKELAKPRLRRATISNPITGVLETAQYRITKSAWLSGYE-DP----VVAR 388

  Fly   390 IGRRIEDMTGLNTRSGSKMQFLKYGFGGHFVPHYDY---FNSKTFSLETVGDRIATVLFYLNNVD 451
            :.||||.:|||:..:..::|...||.||.:.||:|:   :....|.....|:|:||.|||:::|:
 Frog   389 LNRRIEGVTGLDMSTAEELQVANYGIGGQYEPHFDFLRKYEPDAFKKLGTGNRVATWLFYMSDVE 453

  Fly   452 HGGATVFPKLNLAVPTQKGSALFWHN-IDRKSYDYDTRTFHGACPLISGTKLVMTRWIYELDQMF 515
            .|||||||::..||..:||:|:||:| ::....||.||  |.|||::.|.|.|..:||:|..|.|
 Frog   454 AGGATVFPEVGAAVYPKKGTAVFWYNLLESGEGDYSTR--HAACPVLVGNKWVSNKWIHERGQEF 516

  Fly   516 LIPAVL 521
            ..|..|
 Frog   517 RRPCNL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31016NP_001263119.1 P4Ha_N 31..160 CDD:285528 33/128 (26%)
P4Hc 333..508 CDD:214780 71/178 (40%)
p4ha1XP_031761963.1 P4Ha_N 24..111 CDD:400573 20/86 (23%)
P4Hc 337..510 CDD:214780 72/179 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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