DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and AT1G20270

DIOPT Version :10

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_564109.1 Gene:AT1G20270 / 838615 AraportID:AT1G20270 Length:287 Species:Arabidopsis thaliana


Alignment Length:211 Identity:67/211 - (31%)
Similarity:103/211 - (48%) Gaps:27/211 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 EQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVGQSE--NSTTSEVRISRNTWLWYDANPW 392
            |.|:.:|.....|..|...|.:.::...|.:|.:|.|..||  .|..|.||.|..|:|....:..
plant    77 EVLSWEPRAFVYHNFLSKEECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRRGRDKI 141

  Fly   393 LSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFVEDDGQSVFSWK--GNRLLTALFYLN 455
            :..|::|:.|.|.:..:..|.||:::|..|.:||||:|:..|:    |:.|  |.|:.|.|.||:
plant   142 IKTIEKRIADYTFIPADHGEGLQVLHYEAGQKYEPHYDYFVDE----FNTKNGGQRMATMLMYLS 202

  Fly   456 DVALGGATAFPFLR-------------------LAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCP 501
            ||..||.|.||...                   |:|.|..|..|:::::......|..:.|.|||
plant   203 DVEEGGETVFPAANMNFSSVPWYNELSECGKKGLSVKPRMGDALLFWSMRPDATLDPTSLHGGCP 267

  Fly   502 VLQGSKWICNEWFHVG 517
            |::|:||...:|.|||
plant   268 VIRGNKWSSTKWMHVG 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..159 CDD:462433
P4Hc 347..515 CDD:214780 59/190 (31%)
AT1G20270NP_564109.1 PLN00052 79..286 CDD:177683 66/209 (32%)
Blue background indicates that the domain is not in the aligned region.

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