DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and P4ha1

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_742059.2 Gene:P4ha1 / 64475 RGDID:621000 Length:534 Species:Rattus norvegicus


Alignment Length:550 Identity:184/550 - (33%)
Similarity:302/550 - (54%) Gaps:45/550 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSIILSLLCVFPVNGDYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLDQIDE-QQN 67
            :.|:|......|   .::::|.::..|:..|..:|....:|::..:.:.|.:|::.:::|. ...
  Rat     8 MGILLPQCSAHP---GFFTSIGQMTDLIHNEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDRLTST 69

  Fly    68 DRGDLEEYFGNPINAFITIKRLVHDWKFNVFDPVFDSSNFETYKNNLSDSLEKINFKGPTQEDLH 132
            ...|.|.:.|:|:|||..:|||..:|  :..:.:......:.:.:||  ::::..|  |..||..
  Rat    70 ATKDPEGFVGHPVNAFKLMKRLNTEW--SELENLILKDMSDGFISNL--TIQRQYF--PNDEDQV 128

  Fly   133 GATRALLRLQNMYQLNTDHLASGVLHPGEKNALGTSLSASDCFELGKNLCEIKEYSYGSEWLLEA 197
            ||.:||.|||:.|.|:|:.::.|.| ||.|:.  :.|:|.|||||||......:|.:...|:.:|
  Rat   129 GAAKALFRLQDTYNLDTNTISKGNL-PGVKHK--SFLTAEDCFELGKVAYTEADYYHTELWMEQA 190

  Fly   198 RKRLHGKPLGFISPNVSDVEILEHLSSAFNGLGNLKLAYKLNNEILDKKPDHEEALKNKILYEGQ 262
            ..:|....:.    .|..|.:|::||.|....|:|..|..|..::|:..|:|:.|..|.:.:|..
  Rat   191 LMQLEEGEMS----TVDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLVYFEYI 251

  Fly   263 LARER-------------SFAPRKQ-VELPQIAEKEQKESYKLYTQVCRGE-LHQSPREQRNLRC 312
            :::|:             ...|:|: :.:..:.|:::      |..:|||| :..:||.|:.|.|
  Rat   252 MSKEKDANKSASGDQSDQKTTPKKKGIAVDYLPERQK------YEMLCRGEGIKMTPRRQKRLFC 310

  Fly   313 WLYHQG--VPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVGQSENS--T 373
             .||.|  .|.:.|:|.|.|.....|.:...|:::.|:||:.:.:..|..:.|:.|...|..  |
  Rat   311 -RYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLT 374

  Fly   374 TSEVRISRNTWLWYDANPWLSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFVEDDGQS 438
            |::.|:|::.||....:|.:|:|..|::|:|||...:||.||:.|||:||||||||||...|...
  Rat   375 TAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPD 439

  Fly   439 VFS--WKGNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCP 501
            .|.  ..|||:.|.|||::||:.||||.||.:..:|.|.||:.:.||||.:|...|:.|:||.||
  Rat   440 AFRELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACP 504

  Fly   502 VLQGSKWICNEWFHVGAQEFRRPCGLSSDE 531
            ||.|:||:.|:|.|...|||||||.||..|
  Rat   505 VLVGNKWVSNKWLHERGQEFRRPCTLSELE 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 36/134 (27%)
P4Hc 347..515 CDD:214780 77/171 (45%)
P4ha1NP_742059.2 P4Ha_N 25..112 CDD:400573 19/88 (22%)
TPR 205..238 11/32 (34%)
P4Hc 345..518 CDD:214780 77/172 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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