DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and p4ha3

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_021322008.1 Gene:p4ha3 / 563281 ZFINID:ZDB-GENE-041010-4 Length:616 Species:Danio rerio


Alignment Length:541 Identity:173/541 - (31%)
Similarity:267/541 - (49%) Gaps:48/541 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FRLSIILSLLCVFPVN-GDYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLDQI--- 62
            |.|.|:|.||.:...: |:.::::..:.:.:..|..:::....|:|...|..|::|||..::   
Zfish     5 FTLFIVLYLLNMPDESFGEMFTSMLSVNQAVSAERKLIDHLIIYIEHEAQRLEDIKRFFSRVTSL 69

  Fly    63 -DEQQNDRGDLEEYFGNPINAFITIKRLVHDWKFNVFDPVFDSSNFETYKNN---LSDSLEKINF 123
             |...|:..|   ...|||.||..:|||..:| .||........|.:..:.:   :..||.|:  
Zfish    70 HDGIYNEPSD---PIANPIAAFKLVKRLKSEW-LNVVHSTEAEENIKVLREDYRRMESSLPKL-- 128

  Fly   124 KGPTQEDLHGATRALLRLQNMYQLNTDHLASG----VLHPGE--KNALGTSLSASDCFELGKNLC 182
                 |||.||...|:|||::|.|:.:.|..|    :..|.:  |.::...||..|||.:||...
Zfish   129 -----EDLRGAAHGLMRLQDVYNLHVESLVRGHFQQISDPVDFYKLSVSDMLSGDDCFLVGKVAY 188

  Fly   183 EIKEYSYGSEWLLEARKRLHGKPLGFISP-NVSDVE-ILEHLSSAFNGLGNLKLAYKLNNEILDK 245
            ::::|.:...|..||.:...|...   || |...:| .|:||:.:....||:..|..|:.|:|..
Zfish   189 DLEDYYHSVLWFEEAVRLFRGTEW---SPENEGTLEDALDHLAFSHFKTGNISHALSLSRELLLH 250

  Fly   246 KPDHEEALKNKILYEGQLARERSFAPRKQVELPQIAEKEQKESY----KLYTQVCRGELHQSPR- 305
            .|.:.....|...|| :|..|...|....:.|     |.....|    ..|.|:|:.:..| |: 
Zfish   251 DPMNRRVHFNVEKYE-KLLNENLPATSSGLTL-----KRPDGIYLRTRNAYEQLCQTKGSQ-PKH 308

  Fly   306 -EQRNLRCWLYHQGVPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVGQS 369
             |..:|.|..:..|.|...|.|.:.|.:::.|||...|..:..:|...|.::....:.||.|...
Zfish   309 FENPSLFCDYFTNGSPALFLQPIRREIISLQPYVVLFHGFVTQAEAKNIRKYAMPGLRRSVVASG 373

  Fly   370 ENSTTSEVRISRNTWLWYDANPWLSKIKQRLEDVTGLSTES--AEPLQLVNYGIGGQYEPHFDFV 432
            .|..|:|.|||::.||...|:..:.|:.||:..||||:.:.  ||.||:|||||||.||||||..
Zfish   374 MNQATAEYRISKSAWLKESAHEVVGKLDQRITLVTGLNVQPPYAEYLQVVNYGIGGHYEPHFDHA 438

  Fly   433 EDDGQSVFSWK-GNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTK 496
            ..|...::..| |||:.|.:.||:.|..||:|||.:...:||.|:.:.|.|:|||.:...:..|.
Zfish   439 TSDSSPLYRLKTGNRVATIMIYLSPVQAGGSTAFIYANFSVPVVQNAALFWWNLHKNGQGNVDTL 503

  Fly   497 HAGCPVLQGSKW--ICNEWFH 515
            ||||||:.|:||  ..|:.||
Zfish   504 HAGCPVIVGNKWGMFKNKNFH 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 39/144 (27%)
P4Hc 347..515 CDD:214780 71/172 (41%)
p4ha3XP_021322008.1 P4Ha_N 27..157 CDD:311993 39/140 (28%)
P4Hc 350..519 CDD:214780 70/168 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583389
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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