DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and p4ha1a

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_009304776.1 Gene:p4ha1a / 562774 ZFINID:ZDB-GENE-040724-91 Length:541 Species:Danio rerio


Alignment Length:549 Identity:199/549 - (36%)
Similarity:310/549 - (56%) Gaps:41/549 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IILSLLCVFPVNGDYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLDQIDE-QQNDR 69
            :::|||.....:.|::::|..:..||..|..:|....:|::..:.:.|.:|::.:::|. .....
Zfish    11 LLISLLKSSSAHSDFFTSIGHMTDLLFTEKDLVTSLKDYIKAEESKLEQVKQWAEKLDALTATAV 75

  Fly    70 GDLEEYFGNPINAFITIKRLVHDWKFNVFDPVFDSSNFETYKNNLSDSLEKINFKGPTQEDLHGA 134
            .|.|.:.|:|:|||..:|||..:|. .|.|.|....: :.:.:||  ::::..|  |..||.:||
Zfish    76 QDPEGFLGHPVNAFKLMKRLNTEWG-EVEDLVLKDMS-DGFISNL--TIQRQYF--PNDEDQNGA 134

  Fly   135 TRALLRLQNMYQLNTDHLASGVLHPGEKNAL--GTSLSASDCFELGKNLCEIKEYSYGSEWLLEA 197
            .:||||||:.|:|:|..::||.| ||....|  .::|:..|||||||......:|.:...|:.:|
Zfish   135 AKALLRLQDTYKLDTQTISSGDL-PGVNTGLPYKSTLTVEDCFELGKIAYSDADYYHTELWMAQA 198

  Fly   198 RKRL-HGKPLGFISPNVSDVEI---LEHLSSAFNGLGNLKLAYKLNNEILDKKPDHEEALKNKIL 258
            .|:| .|:.        |.|||   |::||.:....|.|:.|.:....:|..:|:|:.||.|...
Zfish   199 LKQLDEGEE--------SSVEIATALDYLSYSVYQQGELERALEYTKRLLTVEPEHQRALGNLKY 255

  Fly   259 YEGQLARERSFAPRKQVELPQIAEKEQ-----KESY----KLYTQVCRGE-LHQSPREQRNLRCW 313
            ::.|||:::.  ..|:....:.::|||     |:.|    :.|.::|||| |..:||.|::|.| 
Zfish   256 FDYQLAKQKK--AEKEQSTKEESKKEQETSDGKKEYLPEKRKYEKLCRGEGLKMTPRRQKHLFC- 317

  Fly   314 LYHQG--VPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVGQSENST--T 374
            .|..|  .|:|.:.|.|.|.....|.:...||::.:.||:.|.|..|..:.|:.:.......  |
Zfish   318 RYFNGNRHPFYTIGPVKQEDEWDRPRIIRYHEIITEQEIEKIKELSKPRLRRATISNPITGVLET 382

  Fly   375 SEVRISRNTWLWYDANPWLSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFVEDDGQSV 439
            :..|||::.||....:|.:.:|.||:||:|||:.::||.||:.|||:||||||||||...|....
Zfish   383 AHYRISKSAWLAAYEHPVVDRINQRIEDITGLNVKTAEELQVANYGVGGQYEPHFDFGRKDEPDA 447

  Fly   440 FS--WKGNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCPV 502
            |.  ..|||:.|.|||::|||.||||.||.:..||.|:||:.:.||||..|...|:.|:||.|||
Zfish   448 FKELGTGNRIATWLFYMSDVAAGGATVFPEVGAAVKPLKGTAVFWYNLFPSGEGDYSTRHAACPV 512

  Fly   503 LQGSKWICNEWFHVGAQEFRRPCGLSSDE 531
            |.|:||:.|:|.|...|||||||||...:
Zfish   513 LVGNKWVSNKWIHERGQEFRRPCGLKETD 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 42/134 (31%)
P4Hc 347..515 CDD:214780 79/171 (46%)
p4ha1aXP_009304776.1 P4Ha_N 28..157 CDD:285528 42/134 (31%)
TPR repeat 172..207 CDD:276809 13/34 (38%)
TPR repeat 212..242 CDD:276809 8/29 (28%)
Fis1 218..262 CDD:304536 13/43 (30%)
P4Hc 352..525 CDD:214780 79/172 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583421
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.750

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