DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaSG1 and CG15864

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_652183.2 Gene:CG15864 / 50001 FlyBaseID:FBgn0040528 Length:490 Species:Drosophila melanogaster


Alignment Length:559 Identity:155/559 - (27%)
Similarity:240/559 - (42%) Gaps:147/559 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKR-FLDQIDEQQNDRGDLEEYFGNPINAF 83
            |.::..||.:||:||..:|:....|::..:.:...::| .:|...|....:.|.|.|.|||:|:|
  Fly    32 YAASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSRENMEMKSDYESYLGNPLNSF 96

  Fly    84 ITIKRLVHDWKFNVFDPVFDSSNFETY----KNNLSDSLEKINFKG---PTQEDLHGATRALLRL 141
            ..|.||...|:           .:..|    :||....:|......   ||..||..|.|.:..|
  Fly    97 RLIHRLHTSWR-----------KWYQYAIKVENNALGHIENARLMRKMLPTSSDLQQACRGIHDL 150

  Fly   142 QNMYQLNTDHLASGVL----HPGEKNALGTSLSASDCFELGK---------------NLCEIK-- 185
            .:.|.|..:.||:|.|    .|      ||.|:|.||..||:               ||..|:  
  Fly   151 MSFYDLKPEELAAGNLAGYSQP------GTGLTAYDCLALGEFSVQKREDDLAEAWYNLSLIRFE 209

  Fly   186 ----EYSYGSEW--LLEARKRL-------HGKPLGFISPNVSDVEILEHLSSAFNGLGNLKLAYK 237
                :|.....|  ||...|:|       ..||.|.|:.|    |:: |...        :|:.|
  Fly   210 NKFDKYRVHKAWGLLLAKNKQLTDAFYHFENKPEGIIASN----EVI-HFKE--------ELSTK 261

  Fly   238 LNNEILDKKPDHEEALKNKILYEGQLARERSFAPRKQVELPQIAEKEQKESYKLYTQVCRGELHQ 302
            .|..::.:||.                                                      
  Fly   262 QNCAVVVQKPS------------------------------------------------------ 272

  Fly   303 SPREQRNLRCWLYHQGVPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVG 367
                  .|.|.......|:.|::|.|:|:|.:|||:...|:|::|:|||.::......:..:..|
  Fly   273 ------RLHCRYNTTTTPFTRIAPLKMEELGLDPYMVVFHDVIYDTEIDGMLNSSNFGLSLTDSG 331

  Fly   368 QSENSTTSEVRISRNTWLWYDANPWLSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFV 432
            |.     ||||.|::::: .||    ..:.:|:.|:||.|.|.::|..|:|||:||.|..|:||.
  Fly   332 QK-----SEVRTSKDSYI-VDA----KTLNERVTDMTGFSMEMSDPFSLINYGLGGHYMLHYDFH 386

  Fly   433 EDDGQSVFSWKGNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKH 497
            |.. .:....:|:|:.|.||||.:|..||||.||.:.:.|.|.|||.:.|||||:|...:.::.|
  Fly   387 EYT-NTTRPKQGDRIATVLFYLGEVDSGGATIFPMINITVTPKKGSAVFWYNLHNSGAMNLKSLH 450

  Fly   498 AGCPVLQGSKWICNEWFHVGAQEFRRPCGLSSDEGKFLH 536
            :.|||:.|||::..:|.:...|.|..||...|:    ||
  Fly   451 SACPVISGSKYVLTKWINELPQMFVTPCMKDSN----LH 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 39/141 (28%)
P4Hc 347..515 CDD:214780 64/167 (38%)
CG15864NP_652183.2 P4Ha_N 35..166 CDD:285528 39/141 (28%)
metallo-dependent_hydrolases <237..>306 CDD:294200 23/141 (16%)
P4Hc 313..467 CDD:214780 62/164 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461953
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

Return to query results.
Submit another query.