DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and PH4alphaMP

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster


Alignment Length:554 Identity:196/554 - (35%)
Similarity:294/554 - (53%) Gaps:47/554 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IILSLLCVFPVNGDYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLDQID-EQQNDR 69
            ::..:|.|...:|:::|:.|.|.:|.:.|..::.:...|:....|..|.|:..:|.|. |..|..
  Fly     7 VLFLVLQVLSCHGEFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQSEIDAIRVEHLNAA 71

  Fly    70 GDLEEYFGNPINAFITIKRLVHDWKFNVFDPVFDSSNFETYKNNLSDSLEKINFKGPTQEDLHGA 134
            ..:::|..||:|||..||||..||:........|||. ..|.:.::...|.::|  |:|:|..|:
  Fly    72 DGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSR-SNYLDTMASLKENLSF--PSQDDFVGS 133

  Fly   135 TRALLRLQNMYQLNTDHLASGVLHPGEKNALGTSLSASDCFELGKNLCEIKEYSYGSEWLLEARK 199
            ..||.|||..|||:...||||:|: |.|  .||::|..|||.||::|..:::|::...||.::.:
  Fly   134 AIALTRLQQTYQLDVAELASGILN-GVK--YGTAMSWQDCFVLGQHLYALRDYNHTVPWLQQSMQ 195

  Fly   200 RLHGKPLGFISPNVSDVEILEHLSSAFNGLGNLKLAYKLNNEILDKKPDHEEAL----------- 253
            .|..:..|..|   :.::.:|.:......:|..:.|..|.|.:|..:||....|           
  Fly   196 LLGEQSYGSES---ASLDFMEAVVEYHREMGAHESALSLVNHVLSIEPDQRSHLLEARQQLEELI 257

  Fly   254 ----KNKILYEGQLARERSFAPRKQVELPQIAEKEQKESYKLYTQVCRGELHQSPREQRNLRCWL 314
                ||.:|:   |...|.            .:..:...:::|.|||||||...|.:||||||.|
  Fly   258 TDGDKNGLLH---LTARRP------------GDYHESREFRMYEQVCRGELAPLPSKQRNLRCRL 307

  Fly   315 YHQGVPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKV---GQSENSTTSE 376
            ....:.|   :|||:|:|::||.|..:|:|:...:.|::.:..:..::||.|   |.:..||.:.
  Fly   308 RKSRLGY---APFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAA 369

  Fly   377 VRISRNTWLWYDANPWLSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFD-FVEDDGQSVF 440
            .|.|:.....|..|.....:.:.:.|.:||:.:.||.||:.||||||.||||:| |.|:......
  Fly   370 FRTSQGASFNYSRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWDSFPENHIYQEG 434

  Fly   441 SWKGNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCPVLQG 505
            ...|||:.|.::||.||..||.||||||.|.|.|.:||||.|||||.|..:|||||||.||||||
  Fly   435 DLHGNRMATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSGDQDFRTKHAACPVLQG 499

  Fly   506 SKWICNEWFHVGAQEFRRPCGLSSDEGKFLHLKD 539
            ||||.|.|.....|:..|||.|...:...||.:|
  Fly   500 SKWIANVWIRERNQDNVRPCDLERGQEISLHYRD 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 46/134 (34%)
P4Hc 347..515 CDD:214780 79/171 (46%)
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 46/134 (34%)
P4Hc 336..509 CDD:214780 79/172 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461959
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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