DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and CG11828

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster


Alignment Length:524 Identity:134/524 - (25%)
Similarity:231/524 - (44%) Gaps:99/524 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LLDVEAFIVEKFDEYLERAQQEQENLKRFLDQ-IDEQQNDRGDLEEYFGNPINAFITIKRLVHDW 93
            ||.:|..::....:|....|.:...::.|.:: :..:.....|...|..||:.:|..::|     
  Fly     4 LLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRR----- 63

  Fly    94 KFNVFDPVFDSSNFETYKNNLSD-----SLEKINFK-GPTQE------------DLHGATRALLR 140
                           ||    :|     .|.:..|| ||.|:            :|..|...:||
  Fly    64 ---------------TY----TDVPKLLELAREEFKPGPFQKFIDYDLSSISDVELETAVTGMLR 109

  Fly   141 LQNMYQLNTDHLASGVLHPGEKNALGTSLSASDCFELGKNLCEIKEYSYGSEWLLEARKRLHGK- 204
            .|.:|.::...:|:|.||..:.|   :.:||:||..:..:|..:.:.....:|...|..:...| 
  Fly   110 FQGVYGMDESEMANGKLHGKQYN---SRMSAADCLAVATHLENVDKGKLACKWFKVAIDQYEEKL 171

  Fly   205 -PLGFISPNVSDVEILEHLSSAFNGLGNLKLAYKLNNEILDKKPDHEEALKNKILYEGQLARERS 268
             |:..:        :....|..:..||...||       :...|..:.|.::.|   |..::|.:
  Fly   172 DPVNRL--------LQTGRSQIYEKLGLTLLA-------MHDLPASQAAFRDSI---GWASKEDN 218

  Fly   269 FAPRKQVELPQIAEKEQKESYKLYTQVCRGELHQSPREQRNLRCWLYHQGVPYYRLSPFKIEQLN 333
            ....|.:       |::.....::...|||: :..| .:..|||.....|.|:.|::|.|:||||
  Fly   219 TDLAKHL-------KDKLAHMFVHVDNCRGK-NLLP-SKSYLRCRYLRDGSPFLRMAPVKLEQLN 274

  Fly   334 VDPYVAYVHEVLWDSE-------IDTIMEHGKGNMERSKVGQSENSTTSEVRISRNTWLWYDANP 391
            ::|:|...|:.:..:|       .|:.:||.|           ::|::.|.::..|      |:.
  Fly   275 IEPFVGLFHDAISPAEQKDLLHLTDSRLEHRK-----------KDSSSVEAKVDTN------ASD 322

  Fly   392 WLSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFVEDDGQSVFSWKGNRLLTALFYLND 456
            .:.:|.||:||:||...|.:|||.:.|||||||...|.|..:......:..|..|..:|:|||:|
  Fly   323 HVRRIHQRIEDITGFDLEESEPLTVSNYGIGGQDFIHLDCEQPKEFIGYYPKEYRSASAMFYLSD 387

  Fly   457 VALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCPVLQGSKWICNEWFHVGAQEF 521
            |.:||..:||.|.....|.:||.|:|:|..:|.:.|.|:..|.||||.|::|:..:|.....|..
  Fly   388 VQMGGYASFPDLGFGFKPRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQWR 452

  Fly   522 RRPC 525
            |:.|
  Fly   453 RKSC 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 29/145 (20%)
P4Hc 347..515 CDD:214780 59/174 (34%)
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 29/145 (20%)
P4Hc 287..445 CDD:214780 58/174 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461960
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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