DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and CG18749

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster


Alignment Length:541 Identity:158/541 - (29%)
Similarity:235/541 - (43%) Gaps:128/541 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKR-FLDQIDEQQNDRGDLEEYFGNPINAF 83
            |.::..||.:||:||..:|:....|::..:.:...::| .:|...|....:.|.|.|.|||:|:|
  Fly    32 YAASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSRENMEMKSDYESYLGNPLNSF 96

  Fly    84 ITIKRLVHDWKFNVFDPVFDSSNFETY----KNNLSDSLEKINFKG---PTQEDLHGATRALLRL 141
            ..|.||...|:           .:..|    :||....:|......   ||..||..|.|.:..|
  Fly    97 RLIHRLHTSWR-----------KWYQYAIKVENNALGHIENARLMRKMLPTSSDLQQACRGIHDL 150

  Fly   142 QNMYQLNTDHLASGVL----HPGEKNALGTSLSASDCFELGK--------NLCE----------- 183
            ...|.|..:.||:|.|    .|      ||.|:|.||..||:        :|.|           
  Fly   151 MYFYDLKPEELAAGNLAGYSQP------GTGLTAYDCLALGEFGVQNQKDDLAEAWYNLSLTRFD 209

  Fly   184 --IKEYSYGSEWLLEARKRLHGKPLGFISPNVSDVEILEHLSSAFNGLGNLKLAYKLNNEILDKK 246
              |::|.....|.|            .::.|....|..:|                     .:.|
  Fly   210 NIIEKYQVHKAWAL------------LLAKNKQLTEAFQH---------------------FENK 241

  Fly   247 PDHEEALKNKILYEGQLARERSFAPRKQVELPQIAEKEQKESYKLYTQVCRGELHQSPREQRNLR 311
            |:...|....|.:||.||.                           ||.|...: |.|  .:.|.
  Fly   242 PEGIVASNEVIHFEGVLAT---------------------------TQNCTAVV-QKP--SKKLH 276

  Fly   312 CWLYHQGVPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVGQSE--NSTT 374
            |.......|:.|::|.|:|:|.:|||:...|:|::|:|||       |.:..|..|.||  :...
  Fly   277 CRYNTSTTPFTRIAPLKMEELGLDPYMVVFHDVIYDTEID-------GMLNSSDFGLSESVSGLK 334

  Fly   375 SEVRISRNTWLWYDANPWLSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFVEDDGQSV 439
            ||||.|:::.: .||    ..:.:|:.|:||||.|.::|..|:|||:||.:..|.||.|....:.
  Fly   335 SEVRTSKDSHI-VDA----KTLNERVTDMTGLSMEMSDPFSLINYGLGGHFILHHDFHEYTNTTR 394

  Fly   440 FSWKGNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCPVLQ 504
            .. :|:|:.|.||||.:|..||||.||.|.:.|.|.|||.:.|||||:|...:.:|.|..|||:.
  Fly   395 LK-QGDRIATVLFYLREVDSGGATVFPMLNITVMPKKGSAVFWYNLHNSGAVNSKTLHTACPVIS 458

  Fly   505 GSKWICNEWFHVGAQEFRRPC 525
            |||::..:|.:...|.|..||
  Fly   459 GSKYVLTKWINELPQMFVTPC 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 39/141 (28%)
P4Hc 347..515 CDD:214780 69/169 (41%)
CG18749NP_001027154.1 P4Ha_N 35..166 CDD:285528 39/141 (28%)
P4Hc 314..468 CDD:214780 67/166 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461965
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.890

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