DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and PH4alphaNE3

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster


Alignment Length:512 Identity:136/512 - (26%)
Similarity:238/512 - (46%) Gaps:67/512 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLDQIDEQ-QNDRGDLEEYFGNPINA 82
            |..||..:|.: ||||  :::....|.|:..::...|||...::.:. .:.:|..|||.|||:::
  Fly    19 DTESAKMDLMQ-LDVE--LIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKGREEEYLGNPLHS 80

  Fly    83 FITIKRLVHDWKFNVFDPVFDSSNFETYKNNLSDSLEKINF------KGPTQEDLHGATRALLRL 141
            |..|:.:..||::..          |..|..:.:  |:|.|      :.|.|.|...|:.::.|:
  Fly    81 FPLIRHMYQDWRYLE----------EFMKKPVGE--EEIQFLRRKLPELPWQVDTEEASVSIFRI 133

  Fly   142 QNMYQLNTDHLASGVLHPGEKNALGTSLSASDCFELGKNLCEIKEYSYGSEWLLEARKRLHGKPL 206
            ...|.:....:|:|::   :.....::|.|.||||:.|...:...:....:|:..::.|:..:..
  Fly   134 AETYGMMPWDMANGLI---DNVRFNSTLPALDCFEVAKMYFKWGYFKQALQWITISKARMKEEYS 195

  Fly   207 G---FISPNVSDVEILEHLSSAFNGLGNLKLAYKLNNEILDKKPD-HEEALKNKILYEGQLARER 267
            |   .:..|..||.:|:              |..|..  ||::.: ||..|....|.:..::...
  Fly   196 GVYEVLGMNRQDVALLQ--------------ARCLVE--LDRRDEAHEVLLDQPDLADNSISLLD 244

  Fly   268 SFA--PRKQVE-LPQIAEKEQKESYKLYTQVCRGELHQSPREQRNLRCWLYHQGVPYYRLSPFKI 329
            .|.  |.:.:: .|::.|.        |.::||.....:|.:   |.|........:..|:|.|:
  Fly   245 QFKANPYEAIDSSPKLGEG--------YKRLCRSSFSPNPSK---LHCRYNSTTSAFLILAPLKM 298

  Fly   330 EQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVGQSENSTTSEVRISRNTWLWYDANPWLS 394
            |:::::|::...|::|.|.:|..::...:..:   |..:..:...:|.|.|..|.|   ..|.|.
  Fly   299 EEISLEPHIVVYHDILPDKDIQQLITLAEPLL---KPTEMFDDNKNEARSSYRTPL---GGPLLD 357

  Fly   395 KIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFVEDDGQSVFSWKGNRLLTALFYLNDVAL 459
            .:.||:.|:|||......|:.::.||.|..|..::||.:........: |:|:.|.:|||||...
  Fly   358 SLTQRMRDITGLQIRQGNPINIIKYGFGAPYTNYYDFFKKRNSESKGF-GDRMATFMFYLNDAPY 421

  Fly   460 GGATAFPFLRLAVPPVKGSLLIWYNLHSSTH-KDFRTKHAGCPVLQGSKWICNEWFH 515
            ||||.||.|.:.||..:|.:|.||||:..|| .:..|.||.|||..||||:...|.|
  Fly   422 GGATVFPRLNVKVPAERGKVLFWYNLNGDTHDMEPTTMHAACPVFHGSKWVMTAWIH 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 35/140 (25%)
P4Hc 347..515 CDD:214780 59/168 (35%)
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 34/138 (25%)
P4Hc 316..478 CDD:214780 59/168 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461963
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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