DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and P4ha3

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_006508007.1 Gene:P4ha3 / 320452 MGIID:2444049 Length:551 Species:Mus musculus


Alignment Length:563 Identity:188/563 - (33%)
Similarity:274/563 - (48%) Gaps:57/563 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LSLLCVFPVNG---------DYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLDQID 63
            |:||.:..:.|         |.:||::.:.|.|..|..::.....||...:....:|.||.|::.
Mouse     7 LALLALLALGGDPAAATGREDTFSALTSVARALAPERRLLGTLRRYLRGEEARLRDLTRFYDKVL 71

  Fly    64 EQQNDRGDLEEYFGNPINAFITIKRLVHDWKFNVFDPVFDSSNFETYKNNLSDSLEKINFKGPTQ 128
            ....   ||:....||:.||..||||..||: ||...:..:.|...    |.|..||:....|..
Mouse    72 SLHE---DLKIPVVNPLLAFTLIKRLQSDWR-NVVHSLEATENIRA----LKDGYEKVEQDLPAF 128

  Fly   129 EDLHGATRALLRLQNMYQLNTDHLASGVLHPGEKNALGT------------SLSASDCFELGKNL 181
            |||.||.|||:|||::|.||...||.||.    :...|:            ||:|.|||::||..
Mouse   129 EDLEGAARALMRLQDVYMLNVKGLARGVF----QRVTGSSITDLYSPRQLFSLTADDCFQVGKPS 189

  Fly   182 C---------EIKEYSYGSEWLLEA---RKRLHGKPLGFISPNVSDVEILEHLSSAFNGLGNLKL 234
            |         :..:|.:...||.||   .:|.||:.......::.|.  |::|:.|...:||:..
Mouse   190 CGSRSLQVAYDTGDYYHAIPWLEEAVSLFRRAHGEWKTEDEASLEDA--LDYLAFACFQVGNVSC 252

  Fly   235 AYKLNNEILDKKPDHEEALKNKILYEGQLARE-RSFAPRKQVELPQIAEKEQKESYKLYTQVCRG 298
            |..|:.|.|...||::...:|.:.||..||.. ...|....::.|.:...:.:::|:...|.   
Mouse   253 ALSLSREFLVYSPDNKRMARNVLKYERLLAENGHQMAAETAIQRPNVPHLQTRDTYEGLCQT--- 314

  Fly   299 ELHQSPREQR--NLRCWLYHQGVPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNM 361
             |...|...:  :|.|.......||..|.|.:.|.:::.|.:|..|:.:.|.|...|.|..:..:
Mouse   315 -LGSQPTHYQIPSLYCSYETNSSPYLLLQPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWL 378

  Fly   362 ERSKVGQSENSTTSEVRISRNTWLWYDANPWLSKIKQRLEDVTGLSTES--AEPLQLVNYGIGGQ 424
            :||.|...|.....|.|||::.||....:|.|..:..|:..:|||..:.  ||.||:|||||||.
Mouse   379 QRSVVASGEKQLQVEYRISKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGH 443

  Fly   425 YEPHFDFVEDDGQSVFSWK-GNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSS 488
            ||||||........::..| |||:.|.:.||:.|..||||||.:...:||.||.:.|.|:|||.|
Mouse   444 YEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRS 508

  Fly   489 THKDFRTKHAGCPVLQGSKWICNEWFHVGAQEFRRPCGLSSDE 531
            ...|..|.|||||||.|.||:.|:|.|...|||||||..:.::
Mouse   509 GEGDGDTLHAGCPVLVGDKWVANKWIHEYGQEFRRPCSTNPED 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 47/133 (35%)
P4Hc 347..515 CDD:214780 75/170 (44%)
P4ha3XP_006508007.1 P4Ha_N 31..157 CDD:369820 47/133 (35%)
P4Hc 363..535 CDD:214780 75/171 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839333
Domainoid 1 1.000 66 1.000 Domainoid score I9954
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4458
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.790

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