DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaSG1 and P4htm

DIOPT Version :10

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001386206.1 Gene:P4htm / 301008 RGDID:1311848 Length:503 Species:Rattus norvegicus


Alignment Length:480 Identity:119/480 - (24%)
Similarity:167/480 - (34%) Gaps:160/480 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 LCEIKEYSYGSEWLLEARKRLHG-----------------KPLGFISPNVSDV-EILEHLSSAFN 227
            :.|..|.:...:|.|....|..|                 ||.|..|.....| .:..||.    
  Rat    12 VAETIEEASNLQWPLPPEHRPSGAATRPGDGEEAPVRPLCKPRGICSRAYFLVLMVFVHLY---- 72

  Fly   228 GLGN-----LKLAYKLNNEILDKKPDHEEALKNKILYEGQLAR----ERSFAPRKQV-------- 275
             |||     |.:.|...:|..|..|...|.....:...|.|.|    :..:..:.||        
  Rat    73 -LGNVLALLLFVHYSNGDESTDPGPQRREQSPQPVPTLGPLTRLEGIKVGYERKVQVVAGRDHFI 136

  Fly   276 ----------ELPQIAEKEQKESYKLYTQVCRGELHQS-----------PREQRNLRCWLYHQGV 319
                      |:|.....|:          ||..:|.:           |.|:       |.:.:
  Rat   137 RTLSLKPLLFEIPGFLSDEE----------CRLIIHLAQMKGLQRSQILPTEE-------YEEAM 184

  Fly   320 PYYRLSPFKIEQL---NVDPYVAYVHEVLWDSEI--------DTIME---------HGKG----- 359
            ...|:|...:.||   |.|..: .:.|||..:.:        :.|.|         .|.|     
  Rat   185 SAMRVSQLDLFQLLDQNHDGRL-QLREVLAQTRLGNGRWMTPENIQEMYSAIKADPDGDGVLSLQ 248

  Fly   360 ---NMER---SKVGQSENSTTSE-VRISRNTWLWY--DANPWLSKIKQRLEDVTGLS---TESAE 412
               ||:.   .|..:|..:.:|| ||.|.:|||..  .|:..:..|:||:..:|.||   .|.:|
  Rat   249 EFSNMDLRDFHKYMRSHKAESSELVRNSHHTWLHQGEGAHHVMRAIRQRVLRLTRLSPEIVELSE 313

  Fly   413 PLQLVNYGIGGQYEPHFD----FVED--------DGQSVFSWKGNRLLTALFYLNDVALGGATAF 465
            |||:|.||.||.|..|.|    :.|.        ..:||......|.:|.|||||:|..||.|.|
  Rat   314 PLQVVRYGEGGHYHAHVDSGPVYPETVCSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVF 378

  Fly   466 PF-----------------LR----------LAVPPVKGSLLIWYNLHSS-----THKDFRTKHA 498
            |.                 ||          |.|.|.:|:.:.|||....     ...|..:.|.
  Rat   379 PVADNRTYDEMSLIQDNVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSLHG 443

  Fly   499 GCPVLQGSKWICNEWFHVGAQEFRR 523
            ||.|.:|:|||.|.|.:|.....|:
  Rat   444 GCLVTRGTKWIANNWINVDPSRARQ 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..159 CDD:462433
P4Hc 347..515 CDD:214780 72/245 (29%)
P4htmNP_001386206.1 EF-hand_7 193..253 CDD:463900 11/60 (18%)
P4Hc 247..459 CDD:214780 67/211 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.