DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and P4HA3

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001275677.1 Gene:P4HA3 / 283208 HGNCID:30135 Length:604 Species:Homo sapiens


Alignment Length:589 Identity:176/589 - (29%)
Similarity:266/589 - (45%) Gaps:76/589 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RLSIILSLLCV-------FPVNGDYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLD 60
            ||:.:|::|.:       ....||.:||::.:.|.|..|..::.....||...:....:|.||.|
Human     6 RLAALLAVLALGTGDPERAAARGDTFSALTSVARALAPERRLLGLLRRYLRGEEARLRDLTRFYD 70

  Fly    61 QIDEQQNDRGDLEEYFGNPINAFITIKRLVHDWKFNVFDPVFDSSNFETYKNNLSDSLEKINFKG 125
            ::.....|.   .....||:.||..||||..||: ||...:..|.|...    |.|..||:....
Human    71 KVLSLHEDS---TTPVANPLLAFTLIKRLQSDWR-NVVHSLEASENIRA----LKDGYEKVEQDL 127

  Fly   126 PTQEDLHGATRALLRLQNMYQLNTDHLASGVLHPGEKNALGT--------SLSASDCFELGKNLC 182
            |..|||.||.|||:|||::|.||...||.||......:|:..        ||:..|||::||...
Human   128 PAFEDLEGAARALMRLQDVYMLNVKGLARGVFQRVTGSAITDLYSPKRLFSLTGDDCFQVGKVAY 192

  Fly   183 EIKEYSYGSEWLLEARKRLHGKPLGFISPNVSDVE-ILEHLSSAFNGLGNLKLAYKLNNEILDKK 246
            ::.:|.:...||.||.....|....:.:.:.:.:| .|:||:.|:...||:..|..|:.|.|...
Human   193 DMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFRAGNVSCALSLSREFLLYS 257

  Fly   247 PDHEEALKNKILYEGQLARERSFAPRKQV-ELPQIAEKEQKESYKLYTQVCRGE--LHQSPREQR 308
            ||::...:|.:.||..||...:....:.| :.|.|...:.:::|:...|....:  |:|.|    
Human   258 PDNKRMARNVLKYERLLAESPNHVVAEAVIQRPNIPHLQTRDTYEGLCQTLGSQPTLYQIP---- 318

  Fly   309 NLRCWLYHQGVPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVGQSENST 373
            :|.|........|..|.|.:.|.::::||:|..|:.:.|||...|.|..:..::||.|...|...
Human   319 SLYCSYETNSNAYLLLQPIRKEVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRSVVASGEKQL 383

  Fly   374 TSEVRISRNTWLWYDANPWLSKIKQRLEDVTGLSTES--AEPLQLVNYGIGGQYEPHFDFVEDDG 436
            ..|.|||::.||....:|.|..:..|:..:|||....  ||.||:|||||||.||||||......
Human   384 QVEYRISKSAWLKDTVDPKLVTLNHRIAALTGLDVRPPYAEYLQVVNYGIGGHYEPHFDHATSPS 448

  Fly   437 QSVFSWK-GNRLLTALFYLNDVALGGATAFPFLRLAVP------------PVKG-------SLLI 481
            ..::..| |||:.|.:.||:.|..||||||.:..|:||            .|||       ::|.
Human   449 SPLYRMKSGNRVATFMIYLSSVEAGGATAFIYANLSVPVVRHCFGGTCTGVVKGTVTHFMLAVLS 513

  Fly   482 WYNL-----HSSTHKDFRTKHAGCPVLQGSKWICNEWFH-------------VGAQEF-----RR 523
            |:.:     ......|..:.....|.|:........|:.             ||.::.     ||
Human   514 WWEISGWPTSGYMSMDRNSADPAAPALKTELLAERSWWSPVAFQRSQEPKAGVGEEKAEQPPGRR 578

  Fly   524 PCGL 527
            ||.|
Human   579 PCQL 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 47/133 (35%)
P4Hc 347..515 CDD:214780 64/194 (33%)
P4HA3NP_001275677.1 P4Ha_N 58..159 CDD:285528 41/108 (38%)
TPR_12 186..252 CDD:290160 17/65 (26%)
P4Hc 356..>478 CDD:214780 50/121 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149275
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4458
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.800

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