DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and phy-2

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_502317.1 Gene:phy-2 / 178170 WormBaseID:WBGene00004025 Length:539 Species:Caenorhabditis elegans


Alignment Length:540 Identity:184/540 - (34%)
Similarity:289/540 - (53%) Gaps:33/540 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SIILSLLCVFPVNGDYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFL-DQIDEQQND 68
            :::|..|.....:.|.::||::|:.:|..|..:....|:|:|..:...::|:|:. :.:....:.
 Worm     3 AVLLVCLLAGLAHADLFTAIADLQHMLGAEKDVTTIIDQYIEAERARLDDLRRYAHEYVHRNAHA 67

  Fly    69 RGDLEEYFGNPINAFITIKRLVHDWKFNVFDPVFDSSNFETYKNNLSDSLEKINFKGPTQEDLHG 133
            .....|:..|||||::.||||..:||  ..:.:..::...|:..|::|:..:...|.|.:|||.|
 Worm    68 ESVGPEFVTNPINAYLLIKRLTTEWK--KVENIMLNNKASTFLKNITDNRVRSEVKFPGEEDLSG 130

  Fly   134 ATRALLRLQNMYQLNTDHLASGVLHPGEKNALGTSLSASDCFELGKNLCEIKEYSYGSEWLLEAR 198
            |..||||||:.|.|:|..|::|:: .|||  :...||..|.||:|::....|:|.:...|:..|.
 Worm   131 AATALLRLQDTYSLDTLDLSNGII-GGEK--VSNKLSGHDTFEVGRSAYNQKDYYHCLMWMQVAL 192

  Fly   199 KRLHGKPLGFISPNVSDVEILEHLSSAFNGLGNLKLAYKLNNEILDKKPDHEEALKNKILYEGQL 263
            .::..:.    .|.:.:.||||:|:.:....||::.|..|...:....|:|..|..|...||..|
 Worm   193 VKIENEN----PPTIEEWEILEYLAYSLYQQGNVRRALSLTKRLAKIAPNHPRAKGNVKWYEDML 253

  Fly   264 ARERSFAP-----RKQVELPQIAEKEQKESYKLYTQVCRGELHQ-SPREQRNLRCWLYHQGVPYY 322
            ..:.....     .|:||...|.|::      .|..:||||:.. .|:.:..|||:| .:..|:.
 Worm   254 QGKDMVGDLPPIVNKRVEYDGIVERD------AYEALCRGEIPPVEPKWKNKLRCYL-KRDKPFL 311

  Fly   323 RLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMER-----SKVGQSENSTTSEVRISRN 382
            :|:|.|:|.|..||.......|:.||||:.|.|.....::|     ||.|:.|::|   .|||::
 Worm   312 KLAPIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHAT---YRISKS 373

  Fly   383 TWLWYDANPWLSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFVEDDGQSVFSW--KGN 445
            .||..|.:|.:.::.:|:||.|.|:..::|.||:.|||:||.|:|||||...:.::.|..  .||
 Worm   374 AWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGN 438

  Fly   446 RLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCPVLQGSKWIC 510
            |:.|.|||::....||||.|..|..||.|.|...|.||||......|.||:||.||||.|.||:.
 Worm   439 RIATVLFYMSQPERGGATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLGVKWVS 503

  Fly   511 NEWFHVGAQEFRRPCGLSSD 530
            |:|.|...|||.|||||..:
 Worm   504 NKWIHEKGQEFTRPCGLEEE 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 43/134 (32%)
P4Hc 347..515 CDD:214780 75/174 (43%)
phy-2NP_502317.1 P4Ha_N 21..154 CDD:285528 43/134 (32%)
TPR_16 169..240 CDD:290168 18/74 (24%)
P4Hc 335..508 CDD:214780 75/175 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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