DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and LOC110438585

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_021326960.1 Gene:LOC110438585 / 110438585 -ID:- Length:441 Species:Danio rerio


Alignment Length:484 Identity:155/484 - (32%)
Similarity:240/484 - (49%) Gaps:76/484 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 EQQNDRGDLEEYFGNPINAFITIKRLVHD--WKFNVFDPVFDSSNFETYKNNLSDSLEKINFKGP 126
            |.:|.    ||...:|:.|:..:.||..:  :.......:.|.|..:.:::.|..:|.      |
Zfish    18 EDENP----EENLRDPVAAYKLLCRLREELIYIIETIQSIIDVSQCDEFQDELKTTLI------P 72

  Fly   127 TQEDLHGATRALLRLQNMYQLNTDHLASGVLHPGEKNALGTSLSASDCFELGKNLCEIKEYSY-- 189
            ..|||.||...|:|||.:|:|..:.:..           .|||.|.:.|.:|:  ...|||.:  
Zfish    73 QYEDLDGAASGLIRLQEIYKLYPEDITK-----------ETSLDADEAFHVGR--VAYKEYKFQH 124

  Fly   190 --------GSEWLLEARKRLHGKPLGFISPNVSDVEILEHLSSAFNGLGNLKLAYKLNNEILDKK 246
                    |..|...:              :.::.::|.:||.:....|:|..|...:.|:|...
Zfish   125 AFLWFSYSGIRWTENS--------------STNEKDLLHYLSLSAKHFGSLPWAIYYSQELLYLN 175

  Fly   247 P-DHEEALK-NKILYEGQLARERSFAPRKQVELPQIAEKEQKESYKLYTQVCRGEL-HQSPREQR 308
            | |:|..|: |::|:..:       :|.     |.|...:...|.  |..:||||: .::.:.||
Zfish   176 PYDNEVKLQLNRLLHFQK-------SPN-----PNIFRLDSLSSN--YEALCRGEVDERTSKRQR 226

  Fly   309 NLRC-WLYHQGVPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVGQSENS 372
            .|.| :....|.|....:|.|.|:|..:|.:...|:|:.|:||:|:.:..:..:.||.|.|....
Zfish   227 ALSCRYSTSGGNPRLMYAPVKEEELWDEPKIIRFHDVISDTEIETLKDIARPQLSRSGVYQDGQG 291

  Fly   373 TTSEVRISRNTWLWYDANPWLSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFVEDDGQ 437
            ..|:.|:|::.:| .|.:|..:.:.||:|||||||.|.||||.:.||||||::|||.|.:.::  
Zfish   292 KISKHRVSQSVFL-DDDDPVDAHVSQRIEDVTGLSMEKAEPLLVQNYGIGGRFEPHIDALGEE-- 353

  Fly   438 SVFSWKGNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCPV 502
                  .:|:.|.|.|::||..||||.|..:.:||.|.|||.:.||||..:...||.||||||||
Zfish   354 ------NDRIATFLIYMSDVEEGGATVFIKVGIAVKPEKGSAVFWYNLQKNGESDFNTKHAGCPV 412

  Fly   503 LQGSKWICNEWFHVGAQEFRRPCGLSSDE 531
            |||:||:.|:|.....|.|||||.|...|
Zfish   413 LQGNKWVANKWIAEFGQVFRRPCSLHKSE 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 24/94 (26%)
P4Hc 347..515 CDD:214780 76/167 (46%)
LOC110438585XP_021326960.1 P4Ha_N <19..100 CDD:311993 23/90 (26%)
P4Hc 265..424 CDD:214780 75/167 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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