DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and LOC100492280

DIOPT Version :10

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_031761347.1 Gene:LOC100492280 / 100492280 XenbaseID:XB-GENE-29081095 Length:552 Species:Xenopus tropicalis


Alignment Length:572 Identity:193/572 - (33%)
Similarity:300/572 - (52%) Gaps:64/572 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RLSIILSLLCVFP-VNGDYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLDQIDE-Q 65
            ::.::|.||.:|. .:.|::::|..:..||:.|..:|....:|::..:|:...:|::.|::|. .
 Frog     2 KIHLVLPLLGLFSCAHADFFTSIGHMTDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADKLDHLT 66

  Fly    66 QNDRGDLEEYFGNPINAFITIKRLVHDW-KFN--VFDPVFDSSNFETYKNNLSDSLEKINFKGPT 127
            .....|.|.:.|:|:|||..:|||..:| |..  :...:.|.     :.:||  ::::..|  |.
 Frog    67 DTATKDPEGFLGHPVNAFKLMKRLNTEWVKLENLILKDISDG-----FISNL--TIQRQYF--PN 122

  Fly   128 QEDLHGATRALLRLQNMYQLNTDHLASGVLHPGEKNALGTSLSASDCFELGKNLCEIKEYSYGSE 192
            .||..||.:||||||:.|.|:||.::.|.| ||.|:.  |||:|.|||:|||......:|.:...
 Frog   123 DEDQTGAAKALLRLQDTYNLDTDTISKGNL-PGVKHK--TSLTAEDCFDLGKTAYTDADYYHTEL 184

  Fly   193 WLLEARKRLHGKPLGFISPNVSDVEILEHLSSAFNGLGNLKLAYKLNNEILDKKPDHEEALKNKI 257
            |:.:|..:|....    ..::..|.:|::||.|....|:|..|..|...:|:..|:|:....|..
 Frog   185 WMEQALSQLDAGE----ESSLDKVMVLDYLSYAVYQQGDLDKALTLTKLLLELDPEHQRGNGNLR 245

  Fly   258 LYEGQLARE---RSFAPRKQVEL------PQIAEKEQKESYKLYTQVCRGE-LHQSPREQRNLRC 312
            .:|..:::|   .|.:|.:..||      |    |:.....:.|.::|||| :..:.|.|:.|.|
 Frog   246 YFEYIMSKESNKSSSSPSEGAELGTRKGRP----KDHLPERQKYEKLCRGEGVKMTSRRQKRLFC 306

  Fly   313 WLYHQG--VPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVG-------- 367
             .|..|  .|...|||.|.|.....|.:...|:::.|.||..:.|..|..:.|:.:.        
 Frog   307 -RYFDGNKDPLLILSPTKQEDEWDKPRIVRYHDIISDEEISKVKELAKPRLRRATISNPITGVLE 370

  Fly   368 ----------------QSENSTTSEVRISRNTWLWYDANPWLSKIKQRLEDVTGLSTESAEPLQL 416
                            |:...||::.|:|::.||....:|.::::.:|:|.||||...:||.||:
 Frog   371 TAQYRISKRRATVHDPQTGKLTTAQYRVSKSAWLSAYEDPVVARLNRRIEGVTGLDMSTAEELQV 435

  Fly   417 VNYGIGGQYEPHFDFVEDDGQSVFS--WKGNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSL 479
            .|||:||||||||||...|....|.  ..|||:.|.|||::||..||||.||.:..||.|.||:.
 Frog   436 ANYGMGGQYEPHFDFARKDEPDAFKELGTGNRVATWLFYMSDVEAGGATVFPEVGAAVYPKKGTA 500

  Fly   480 LIWYNLHSSTHKDFRTKHAGCPVLQGSKWICNEWFHVGAQEFRRPCGLSSDE 531
            :.||||..|...|:.|:||.||||.|:||:.|:|.|...|||||||.||..|
 Frog   501 VFWYNLFESGEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPCNLSELE 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..159 CDD:462433 43/139 (31%)
P4Hc 347..515 CDD:214780 77/193 (40%)
LOC100492280XP_031761347.1 P4Ha_N 23..154 CDD:462433 43/140 (31%)
P4Hc 341..536 CDD:214780 77/194 (40%)

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