DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and p4ha1

DIOPT Version :9

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_031761963.1 Gene:p4ha1 / 100490484 XenbaseID:XB-GENE-987760 Length:526 Species:Xenopus tropicalis


Alignment Length:547 Identity:192/547 - (35%)
Similarity:294/547 - (53%) Gaps:40/547 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RLSIILSLLCVFP-VNGDYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLDQIDE-Q 65
            ::.::|.||.:|. .:.|::::|..:..||:.|..:|....:|::..:|:...:|::.|::|. .
 Frog     2 KIHLVLPLLGLFSCAHADFFTSIGHMIDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADKLDHLT 66

  Fly    66 QNDRGDLEEYFGNPINAFITIKRLVHDW-KFN--VFDPVFDSSNFETYKNNLSDSLEKINFKGPT 127
            .....|.|.|.|:|:|||..:|||..:| |..  :...:.|.     :.:||  ::::..|  |.
 Frog    67 DTATKDPEGYLGHPVNAFKLMKRLNTEWVKLENLILKDISDG-----FISNL--TIQRQYF--PN 122

  Fly   128 QEDLHGATRALLRLQNMYQLNTDHLASGVLHPGEKNALGTSLSASDCFELGKNLCEIKEYSYGSE 192
            .||..||.:||||||:.|.|:||.::.|.| ||.|:.  |||:|.|||:|||......:|.:...
 Frog   123 DEDQTGAAKALLRLQDTYNLDTDTISKGNL-PGVKHK--TSLTAEDCFDLGKTAYTDADYYHTEL 184

  Fly   193 WLLEARKRLHGKPLGFISPNVSDVEILEHLSSAFNGLGNLKLAYKLNNEILDKKPDHEEALKNKI 257
            |:.:|..:|....    ..::..|.:|::||.|....|:|..|..|....|:..|:|:....|..
 Frog   185 WMEQALSQLDAGE----ESSLDKVMVLDYLSYAVYQQGDLDKALTLTKRSLELDPEHQRGNGNLR 245

  Fly   258 LYEGQLARERSFAPRKQVEL------PQIAEKEQKESYKLYTQVCRGE-LHQSPREQRNLRCWLY 315
            ....:.:.:.|.:|.:..||      |    |:..|..| |.::|||| :..:.|.|:.|.| .|
 Frog   246 HIMSKESNKSSSSPSEGAELRTRKGRP----KDHLEKEK-YEKLCRGEGVKMTSRRQKRLFC-RY 304

  Fly   316 HQGV--PYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVGQSENST--TSE 376
            ..|.  |...|||.|.|.....|.:...|:::.|.||..:.|..|..:.|:.:.......  |::
 Frog   305 FDGKKDPLLILSPTKQEDEWDKPRIVRYHDIISDEEISKVKELAKPRLRRATISNPITGVLETAQ 369

  Fly   377 VRISRNTWLWYDANPWLSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFVEDDGQSVFS 441
            .||:::.||....:|.::::.:|:|.||||...:||.||:.||||||||||||||:.......|.
 Frog   370 YRITKSAWLSGYEDPVVARLNRRIEGVTGLDMSTAEELQVANYGIGGQYEPHFDFLRKYEPDAFK 434

  Fly   442 --WKGNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCPVLQ 504
              ..|||:.|.|||::||..||||.||.:..||.|.||:.:.||||..|...|:.|:||.||||.
 Frog   435 KLGTGNRVATWLFYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNLLESGEGDYSTRHAACPVLV 499

  Fly   505 GSKWICNEWFHVGAQEFRRPCGLSSDE 531
            |:||:.|:|.|...|||||||.||..|
 Frog   500 GNKWVSNKWIHERGQEFRRPCNLSELE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 43/137 (31%)
P4Hc 347..515 CDD:214780 75/171 (44%)
p4ha1XP_031761963.1 P4Ha_N 24..111 CDD:400573 24/91 (26%)
P4Hc 337..510 CDD:214780 75/172 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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