DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG1 and p4htm

DIOPT Version :10

Sequence 1:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_002933103.2 Gene:p4htm / 100486123 XenbaseID:XB-GENE-950282 Length:505 Species:Xenopus tropicalis


Alignment Length:388 Identity:98/388 - (25%)
Similarity:143/388 - (36%) Gaps:129/388 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 KPLGFISPNV---SDVEILEHLSSAFNGLGNLKL----AYK--LNN---------EILDKKPDHE 250
            |||.|..||.   .:.::|.|| :...||...::    .||  ::|         .:||...|.:
 Frog   145 KPLLFEIPNFLTEEECKLLIHL-ARLKGLQTSQILPVDGYKEAMDNLDISKADIFNLLDHNQDGQ 208

  Fly   251 EALKNKILYEGQLARERSFAPRKQVELPQIAEKEQKESYKLYTQVCRGELHQSPREQRNLRCWLY 315
            ..:| ::|...:|...|...|           :..:|.|        ..|...|           
 Frog   209 LQIK-EVLTHSRLGNGRWMTP-----------ENIREMY--------SALRADP----------- 242

  Fly   316 HQGVPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVGQSENSTTSEVRIS 380
             .|.....|..||  :||:..:..|                         :|:.|.:.:..||.|
 Frog   243 -DGNGVLSLDEFK--KLNLRDFHKY-------------------------LGKQEVTMSDLVRNS 279

  Fly   381 RNTWLWY--DANPWLSKIKQRLEDVTGLS---TESAEPLQLVNYGIGGQYEPHFD----FVE--- 433
            .:|||:.  .|:..|..|:||:..:|.|.   .|::||||:|.|..||.|..|.|    |.|   
 Frog   280 HHTWLYQGEGAHHVLRSIRQRVIKLTHLPLDIVENSEPLQVVRYDTGGHYHAHMDSGPVFPETAC 344

  Fly   434 -----DDGQSVFSWKGNRLLTALFYLNDVALGGATAFPF-----------------LR------- 469
                 ...::.......|.:|.|||||:|..||.|.||.                 ||       
 Frog   345 THTKLTTNETAPFETSCRYVTVLFYLNNVTGGGETTFPVADNRTYEELSLIQNDVDLRDTRKHCD 409

  Fly   470 ---LAVPPVKGSLLIWYNLHSSTHK------DFRTKHAGCPVLQGSKWICNEWFHVGAQEFRR 523
               |.:.|.:|:.:.||| :.|..|      |....|.||.|..|:|||.|.|.:|...:.|:
 Frog   410 KGNLRIKPRQGTAVFWYN-YLSDGKGWVGDVDEFALHGGCLVTAGTKWIANNWINVDPNKQRQ 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG1NP_733376.1 P4Ha_N 23..159 CDD:462433
P4Hc 347..515 CDD:214780 63/217 (29%)
p4htmXP_002933103.2 FRQ1 <195..262 CDD:444056 18/100 (18%)
P4Hc 273..462 CDD:214780 60/189 (32%)
Blue background indicates that the domain is not in the aligned region.

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