DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31013 and AT5G66060

DIOPT Version :9

Sequence 1:NP_733394.3 Gene:CG31013 / 326111 FlyBaseID:FBgn0051013 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_201407.4 Gene:AT5G66060 / 836738 AraportID:AT5G66060 Length:289 Species:Arabidopsis thaliana


Alignment Length:214 Identity:73/214 - (34%)
Similarity:107/214 - (50%) Gaps:29/214 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 EQIGLDPYVVLYHEVLSAREISMLIGKAAQNM-KNTKIHKERAVPKKNRGRTAKGFWLKKESNEL 383
            |.|..:|...:||..|:..|...||..|..:| |:|.:.::......:|.||:.|.:|.:..::.
plant    79 EIISWEPRASVYHNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLARGRDKT 143

  Fly   384 TKRITRRIMDMTGFDLADSEGFQVINYGIGGHYFLHMDYFDFASSNHTDTRSRYSIDLGDRIATV 448
            .:.|.:||.|.|...:...||.||::|.||..|..|.|||    .:..:||:.     |.|||||
plant   144 IREIEKRISDFTFIPVEHGEGLQVLHYEIGQKYEPHYDYF----MDEYNTRNG-----GQRIATV 199

  Fly   449 LFYLTDVEQGGATVF-------------------GDVGYYVSPQAGTAIFWYNLDTDGNGDPRTR 494
            |.||:|||:||.|||                   |..|..|.|:.|.|:.::::..|...||.:.
plant   200 LMYLSDVEEGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSMTPDATLDPSSL 264

  Fly   495 HAACPVIVGSKWVMTEWIR 513
            |..|.||.|:||..|:|:|
plant   265 HGGCAVIKGNKWSSTKWLR 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31013NP_733394.3 P4Ha_N 31..160 CDD:285528
TPR_11 178..248 CDD:290150
TPR repeat 211..246 CDD:276809
P4Hc 336..513 CDD:214780 66/196 (34%)
AT5G66060NP_201407.4 PLN00052 74..288 CDD:177683 73/214 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.920

Return to query results.
Submit another query.