DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31013 and P4ha1

DIOPT Version :9

Sequence 1:NP_733394.3 Gene:CG31013 / 326111 FlyBaseID:FBgn0051013 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_742059.2 Gene:P4ha1 / 64475 RGDID:621000 Length:534 Species:Rattus norvegicus


Alignment Length:519 Identity:155/519 - (29%)
Similarity:248/519 - (47%) Gaps:40/519 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SLVTMVPLLELEKKLIDNLENYTNALEQKLEIIRSQLLVIRAENEKGRRNAISYLSNPLNGFSII 95
            |:..|..|:..||.|:.:|::|..|.|.|||.|:.....:........::...::.:|:|.|.::
  Rat    24 SIGQMTDLIHNEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDRLTSTATKDPEGFVGHPVNAFKLM 88

  Fly    96 RRLHQDWINWRKYMEQPVGIWQLKAFYSWKDELPTERDLWDACEGIARIQSTYDLKVGDFINGNI 160
            :||:.:|......:.:.:....:......:...|.:.|...|.:.:.|:|.||:|.......||:
  Rat    89 KRLNTEWSELENLILKDMSDGFISNLTIQRQYFPNDEDQVGAAKALFRLQDTYNLDTNTISKGNL 153

  Fly   161 NGKQYNDSMSTADILSVGAYLFMKNRPSDAIQWLQEVPQRLQEELLIQPRHLPIKEVDALRLLAE 225
            .|.::...::..|...:|...:.:........|:::...:|:|..:     ..:.:|..|..|:.
  Rat   154 PGVKHKSFLTAEDCFELGKVAYTEADYYHTELWMEQALMQLEEGEM-----STVDKVSVLDYLSY 213

  Fly   226 AQIKDQNYSEALPLLHNCLKLQPHDARV-------LRLWKKTTDFIE----NQPDQSPTENKK-- 277
            |..:..:..:||.|....|:|.|...|.       ..:..|..|..:    :|.||..|..||  
  Rat   214 AVYQQGDLDKALLLTKKLLELDPEHQRANGNLVYFEYIMSKEKDANKSASGDQSDQKTTPKKKGI 278

  Fly   278 --RNVPIANAFKLSCNGPLESST-----RLHC-FYNFTTTPFLRLAPLKTEQIGLDPYVVLYHEV 334
              ..:|....:::.|.|.....|     ||.| :::....|...|||.|.|.....|.::.:|::
  Rat   279 AVDYLPERQKYEMLCRGEGIKMTPRRQKRLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDI 343

  Fly   335 LSAREISMLIGKAAQNMKNTKIHKERAVPKKNRGRTA-----KGFWLKKESNELTKRITRRIMDM 394
            :|..||.::...|...:....:|.    |:..:..||     |..||....:.:..||..||.|:
  Rat   344 ISDAEIEIVKDLAKPRLSRATVHD----PETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDL 404

  Fly   395 TGFDLADSEGFQVINYGIGGHYFLHMDYFDFASSNHTDTRSRYSIDLGDRIATVLFYLTDVEQGG 459
            ||.|::.:|..||.|||:||.|..|   ||||..:..|  :...:..|:||||.|||::||..||
  Rat   405 TGLDVSTAEELQVANYGVGGQYEPH---FDFARKDEPD--AFRELGTGNRIATWLFYMSDVSAGG 464

  Fly   460 ATVFGDVGYYVSPQAGTAIFWYNLDTDGNGDPRTRHAACPVIVGSKWVMTEWIREKRQIFIRPC 523
            ||||.:||..|.|:.|||:|||||...|.||..||||||||:||:|||..:|:.|:.|.|.|||
  Rat   465 ATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQEFRRPC 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31013NP_733394.3 P4Ha_N 31..160 CDD:285528 29/128 (23%)
TPR_11 178..248 CDD:290150 13/69 (19%)
TPR repeat 211..246 CDD:276809 8/34 (24%)
P4Hc 336..513 CDD:214780 79/181 (44%)
P4ha1NP_742059.2 P4Ha_N 25..112 CDD:400573 19/86 (22%)
TPR 205..238 10/32 (31%)
P4Hc 345..518 CDD:214780 79/181 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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