DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31013 and p4ha2

DIOPT Version :9

Sequence 1:NP_733394.3 Gene:CG31013 / 326111 FlyBaseID:FBgn0051013 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:553 Identity:162/553 - (29%)
Similarity:251/553 - (45%) Gaps:82/553 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 HSLSLV-------------------TMVPLLELEKKLIDNLENYTNALEQKLEIIRSQLLVIRAE 73
            |::||:                   .|..|:..|:.|:.:|:.|....|::|..|:.....:...
 Frog     4 HAISLILLSLCCIWEVQTEVFTSTGQMTDLIFRERDLLQSLKEYIREEEERLSKIKRWASEVDEL 68

  Fly    74 NEKGRRNAISYLSNPLNGFSIIRRLHQDWINWRKYMEQPVGIWQLKAFYSWKDELPTERDLWDAC 138
            :.:...:...||.:|:|.:.:::|.:.||.:....:.|......:..|...::..|||.|...|.
 Frog    69 SSRSTADPEGYLGHPVNAYKLVKRFNTDWSSLENLVLQDSAKGFIANFTFQREYFPTEEDETGAA 133

  Fly   139 EGIARIQSTYDLKVGDFINGNINGKQYNDSMSTADILSVGAYLFMKNRPSDAIQWLQEVPQRLQE 203
            ..:.|||.||.|.......|.:.|..|..|:|..|...:|...:........:.|:|:..:::.|
 Frog   134 RALMRIQDTYKLDPDVIAKGKLPGTNYISSLSADDSFGMGKIAYHDGDYYHTVLWMQQALKQMDE 198

  Fly   204 ELLIQPRHLPIKEVDALRLLAEAQIKDQNYSEALPLLHNCLKLQP-HDARV--LRLWKKTTDFIE 265
                 .....:.:||.|..|:....:..:...||.|....|.|.| ||..|  |:.::|..:..:
 Frog   199 -----GEDAVVNKVDVLDYLSYTVFQLGDVPRALELTKRLLALDPNHDRAVNNLKYFEKMQEKQK 258

  Fly   266 ---NQPDQSPTENKKRN----------VPIANAFKLSCNG------PLESSTRLHC-FYNFTTTP 310
               .|.:.:.||:..|.          :|..:.::..|.|      | ....||.| ::|...:|
 Frog   259 AELKQNESTNTESATRQPGVYSRPLDYLPERDVYEALCRGEGVKMNP-RRQRRLFCRYHNGNRSP 322

  Fly   311 FLRLAPLKTEQIGLDPYVVLYHEVLSAREISMLIGKAAQNMKNTKIHKERAVPKKNRG------- 368
            :|.|:|:|.|.....|.:|.|...||..||:.:              ||.|.||..|.       
 Frog   323 YLILSPVKVEDEWDSPRIVRYLNALSDEEIAKI--------------KELAKPKLARATVRDPKT 373

  Fly   369 --------RTAKGFWLKKESNELTKRITRRIMDMTGFDLADSEGFQVINYGIGGHYFLHMDYFDF 425
                    |.:|..||::..:.:..|:..|:..:||..:..:|..||.|||:||.|..|   |||
 Frog   374 GVLSVANYRVSKSAWLEENDDPVIARVNLRMQAITGLTVDTAELLQVANYGMGGQYEPH---FDF 435

  Fly   426 ASSNHTDTRSRYSIDLGDRIATVLFYLTDVEQGGATVFGDVGYYVSPQAGTAIFWYNLDTDGNGD 490
            :..:..|...|  :..|:|:||.|.|::|||.||||||.|.|..:.|:.|||:|||||...|.||
 Frog   436 SRKDEPDVFKR--LGTGNRVATFLNYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGD 498

  Fly   491 PRTRHAACPVIVGSKWVMTEWIREKRQIFIRPC 523
            .|||||||||:||||||..:|..|:.|.|:|||
 Frog   499 YRTRHAACPVLVGSKWVSNKWFHERGQEFLRPC 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31013NP_733394.3 P4Ha_N 31..160 CDD:285528 32/147 (22%)
TPR_11 178..248 CDD:290150 13/69 (19%)
TPR repeat 211..246 CDD:276809 8/34 (24%)
P4Hc 336..513 CDD:214780 77/191 (40%)
p4ha2XP_012814344.2 P4Ha_N 27..113 CDD:400573 17/85 (20%)
TPR repeat 166..201 CDD:276809 5/39 (13%)
TPR repeat 206..236 CDD:276809 8/29 (28%)
P4Hc 348..521 CDD:214780 77/191 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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