DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31013 and PH4alphaNE1

DIOPT Version :9

Sequence 1:NP_733394.3 Gene:CG31013 / 326111 FlyBaseID:FBgn0051013 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster


Alignment Length:545 Identity:180/545 - (33%)
Similarity:262/545 - (48%) Gaps:57/545 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVMLFHSTLVLGHRPLEKSHSLSLVTMVPLLELEKKLIDNLENYTNALEQKLEIIRSQLLVIRAE 73
            ||:|.....:|....|...:..|:..:..||..|:.|...|.:..||::..|:.:.|:|..|..|
  Fly     4 LVLLVGLIFLLAQGSLASDYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKE 68

  Fly    74 NEKGRRNAISYLSNPLNGFSIIRRLHQDWINWRKYMEQPVGIWQLKA----FYSWKD---ELPTE 131
            :.....:..:||:||:|.:.:::|||.||    ..||   |..||.|    |.:.::   ..|::
  Fly    69 HTMAASDTENYLTNPVNVYRLMKRLHTDW----SLME---GRVQLMAEEMNFNATREYGLSYPSQ 126

  Fly   132 RDLWDACEGIARIQSTYDLKVGDFINGNINGKQYNDSMSTADILSVGAYLFMKNRPSDAIQWLQE 196
            .|:..|...:.|:||||.|.|.....|.:||.:|...||..|...:|..||.....::...||:|
  Fly   127 EDVEGAALALVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLRE 191

  Fly   197 VPQRLQEELLIQPRHL-PIKEVDALRL-----LAEAQIKDQNYSEALPLLHNCLKLQPHDARVLR 255
            ..:||:.:....|.|| |....|.:.|     .|::..:..::..|..|....|:..|...|...
  Fly   192 SMERLRRQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDPKRIRNWH 256

  Fly   256 LWKKTTDFIENQPDQSPTENKKRNVPIANAFKLS---------CNGPLESSTR--LHCFYNFTTT 309
            |..|.|...|:..|....::       ::::.||         |.|.:....|  |.|.|:....
  Fly   257 LGDKGTAPPEDIDDVYLPKH-------SDSYSLSQEFAKYEKVCRGEVHPIVRQELRCRYSRGNH 314

  Fly   310 PFLRLAPLKTEQIGLDPYVVLYHEVLSAREISMLIGKAAQNMKNTKIHKERAVP------KKNRG 368
            |:..|||||.|:..|||||..:|::||..:||.|     :.|...::|:....|      ||:..
  Fly   315 PYRFLAPLKLEEHSLDPYVATFHDILSPGKISQL-----REMAVPRMHRSTVNPLPGGQLKKSAF 374

  Fly   369 RTAKGFWLKKESNELTKRITRRIMDMTGFDLADSEGFQVINYGIGGHYFLHMDYFDFASSNHTDT 433
            |.:|..||..||:.....:.|.:.|.||.|....|..||.|||:||||..|.|:  |...||   
  Fly   375 RVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDF--FRDPNH--- 434

  Fly   434 RSRYSIDLGDRIATVLFYLTDVEQGGATVFGDVGYYVSPQAGTAIFWYNLDTDGNGDPRTRHAAC 498
               |..:.|:||||.:|||::|||||||.|..:...|.||.|..:|||||....:.|.||:||.|
  Fly   435 ---YPAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTKHAGC 496

  Fly   499 PVIVGSKWVMTEWIREKRQIFIRPC 523
            ||:.||||:...||.|..|.|.|||
  Fly   497 PVLKGSKWIGNVWIHEVTQTFARPC 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31013NP_733394.3 P4Ha_N 31..160 CDD:285528 41/135 (30%)
TPR_11 178..248 CDD:290150 18/75 (24%)
TPR repeat 211..246 CDD:276809 9/40 (23%)
P4Hc 336..513 CDD:214780 74/182 (41%)
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 41/135 (30%)
P4Hc 341..511 CDD:214780 74/182 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461812
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

Return to query results.
Submit another query.