DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31013 and P4ha3

DIOPT Version :9

Sequence 1:NP_733394.3 Gene:CG31013 / 326111 FlyBaseID:FBgn0051013 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_038938408.1 Gene:P4ha3 / 361612 RGDID:735150 Length:549 Species:Rattus norvegicus


Alignment Length:519 Identity:140/519 - (26%)
Similarity:210/519 - (40%) Gaps:89/519 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SLVTMVPLLELEKKLIDNLENYTNALEQKLEIIRSQLLVIRAENEKGRRNAISYLSNPLNGFSII 95
            :|.::...|..|::|:..|..|....|.:|..:......:.:.:|..:...:    |||..|::|
  Rat    33 ALTSVARALAPERRLLGTLRRYLRGEEARLRDLTRFYDKVLSLHEDLKIPVV----NPLLAFTLI 93

  Fly    96 RRLHQDWINWRKYMEQPVGIWQLKAFY-SWKDELPTERDLWDACEGIARIQSTYDLKVGDFING- 158
            :||..||.|....:|....|..||..| ..:.:||...||..|...:.|:|..|.|.|.....| 
  Rat    94 KRLQSDWRNVVHSLEATENIRALKDGYEKVEQDLPAFEDLEGAARALMRLQDVYMLNVKGLAQGV 158

  Fly   159 --NINGKQYND--------SMSTADILSVGAYLFMKNRPSDAIQWLQEVPQ---------RLQEE 204
              .:.|....|        |::..|...||...:.......||.||:|...         :.::|
  Rat   159 FQRVTGSSITDLYSPRQLFSLTADDCFQVGKVAYDTGDYYHAIPWLEEAVSLFRRSYGEWKTEDE 223

  Fly   205 LLIQPRHLPIKEVDALRLLAEAQIKDQNYSEALPLLHNCLKLQPHDARVLRLWKKTTDFIENQPD 269
            ..::         |||..||.|..:..|.|.||.|....|...|.:.|:.|...|....:.....
  Rat   224 ASLE---------DALDYLAFACYQVGNVSCALSLSREFLVYSPDNKRMARNVLKYERLLAENGH 279

  Fly   270 QSPTEN--KKRNVP---IANAFKLSCNGPLESSTR-----LHCFYNFTTTPFLRLAPLKTEQIGL 324
            ....|.  ::.|||   ..:.::..|.......|.     |:|.|...::|:|.|.|.:.|.|.|
  Rat   280 LMAAETAIQRPNVPHLQTRDTYEGLCQTLGSQPTHYQIPSLYCSYETNSSPYLLLQPARKEVIHL 344

  Fly   325 DPYVVLYHEVLSAREISMLIGKAAQNMKNTKIHKERAVPKKNRG-------------RTAKGFWL 376
            .|.|.|||:.:|..|        ||.:      :|.|.|...|.             |.:|..||
  Rat   345 RPLVALYHDFVSDEE--------AQKI------RELAEPWLQRSVVASGEKQLQVEYRISKSAWL 395

  Fly   377 KKESNELTKRITRRIMDMTGFDLAD--SEGFQVINYGIGGHYFLHMDYFDFASSNHTDTRSRYSI 439
            |...:.:...:.|||..:||.|:..  :|..||:||||||||..|.|:....||      ..|.:
  Rat   396 KDTVDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSS------PLYKM 454

  Fly   440 DLGDRIATVLFYLTDVEQGGATVFGDVGYYVSPQAGTAIFWYNLDTDG--NGDPRTRHAACPVI 501
            ..|:|:||::.||:.||.||||.| ..|.:..|    .:.|   .|.|  :.|..:...|.|::
  Rat   455 KSGNRVATLMIYLSSVEAGGATAF-IYGNFSVP----VVKW---PTSGYTSMDRNSEDPAAPIL 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31013NP_733394.3 P4Ha_N 31..160 CDD:285528 35/132 (27%)
TPR_11 178..248 CDD:290150 19/78 (24%)
TPR repeat 211..246 CDD:276809 12/34 (35%)
P4Hc 336..513 CDD:214780 56/183 (31%)
P4ha3XP_038938408.1 P4Ha_N 34..108 CDD:400573 19/77 (25%)
P4Hc 356..>478 CDD:214780 47/141 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343163
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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