DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31013 and P4ha2

DIOPT Version :9

Sequence 1:NP_733394.3 Gene:CG31013 / 326111 FlyBaseID:FBgn0051013 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001101745.1 Gene:P4ha2 / 360526 RGDID:1309673 Length:535 Species:Rattus norvegicus


Alignment Length:539 Identity:162/539 - (30%)
Similarity:247/539 - (45%) Gaps:81/539 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SLVTMVPLLELEKKLIDNLENYTNALEQKLEIIRSQLLVIRAENEKGRRNAISYLSNPLNGFSII 95
            |:..|..|:..||.|:.:|:.|..|.|.||..|:|....:.|...|...:...||::|:|.:.::
  Rat    26 SIGHMTDLIYAEKDLVQSLKEYILAEEAKLSKIKSWASKMEALTSKSAADPEGYLAHPVNAYKLV 90

  Fly    96 RRLHQDWINWRKYMEQPVGIWQLKAFYSWKDELPTERDLWDACEGIARIQSTYDLKVGDFINGNI 160
            :||:.||......:.|......:......:...||:.|...|...:.|:|.||.|.......|.:
  Rat    91 KRLNTDWPALGDLVLQDAAAGFVANLSVQRQFFPTDEDESGAARALMRLQDTYKLDPDMISRGEL 155

  Fly   161 NGKQYNDSMSTADILSVGAYLFMKNRPSDAIQWLQEVPQRLQEELLIQPRHLPIKEVDA------ 219
            .|.:|...:|..|...:|...:.:......:.|:::|                :|::||      
  Rat   156 PGTKYQAMLSVDDCFGMGRSAYNEGDYYHTVLWMEQV----------------LKQLDAGEEATV 204

  Fly   220 -----LRLLAEAQIKDQNYSEALPLLHNCLKLQPHDARV---LRLWKKTTD-----FIENQPD-- 269
                 |..|:.|..:..:...|:.|....|.|.|...|.   ||.:::..:     .:.||.|  
  Rat   205 TKSLVLDYLSYAVFQLGDLHRAVELTRRLLSLDPSHERAGGNLRYFERLLEEERGKSLSNQTDAG 269

  Fly   270 ----QSPTENKKRNVPIANAFKLSCNGPLESST-----RLHCFYNF-TTTPFLRLAPLKTEQIGL 324
                ::..|.....:|..:.::..|.|.....|     ||.|.|:. ...|.|.:||.|.|....
  Rat   270 LASQENLYERPVDYLPERDVYESLCRGEGIKMTPRRQKRLFCRYHHGNRVPQLLIAPFKEEDEWD 334

  Fly   325 DPYVVLYHEVLSAREISMLIGKAAQNMKNTKIHKERAVPKKNRG---------------RTAKGF 374
            .|::|.|::|:|..||..:              ||.|.||..|.               |.:|..
  Rat   335 SPHIVRYYDVMSDEEIERI--------------KEIAKPKLARATVRDPKTGVLTVASYRVSKSS 385

  Fly   375 WLKKESNELTKRITRRIMDMTGFDLADSEGFQVINYGIGGHYFLHMDYFDFASSNHTDTRSRYSI 439
            ||:::.:.:..|:.||:..:||..:..:|..||.|||:||.|..|   |||:.|:..|...|  :
  Rat   386 WLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPH---FDFSRSDERDAFKR--L 445

  Fly   440 DLGDRIATVLFYLTDVEQGGATVFGDVGYYVSPQAGTAIFWYNLDTDGNGDPRTRHAACPVIVGS 504
            ..|:|:||.|.|::|||.||||||.|:|..:.|:.|||:|||||...|.||.|||||||||:||.
  Rat   446 GTGNRVATFLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGC 510

  Fly   505 KWVMTEWIREKRQIFIRPC 523
            |||..:|..|:.|.|:|||
  Rat   511 KWVSNKWFHERGQEFLRPC 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31013NP_733394.3 P4Ha_N 31..160 CDD:285528 35/128 (27%)
TPR_11 178..248 CDD:290150 13/80 (16%)
TPR repeat 211..246 CDD:276809 9/45 (20%)
P4Hc 336..513 CDD:214780 78/191 (41%)
P4ha2NP_001101745.1 P4Ha_N 27..104 CDD:400573 23/76 (30%)
P4Hc 346..519 CDD:214780 78/191 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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