DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31013 and p4ha1

DIOPT Version :9

Sequence 1:NP_733394.3 Gene:CG31013 / 326111 FlyBaseID:FBgn0051013 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_031761963.1 Gene:p4ha1 / 100490484 XenbaseID:XB-GENE-987760 Length:526 Species:Xenopus tropicalis


Alignment Length:529 Identity:161/529 - (30%)
Similarity:248/529 - (46%) Gaps:67/529 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SLVTMVPLLELEKKLIDNLENYTNALEQKLEIIRSQLLVIRAENEKGRRNAISYLSNPLNGFSII 95
            |:..|:.||..||.|:.:|::|..|.||||..|:.....:....:...::...||.:|:|.|.::
 Frog    23 SIGHMIDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADKLDHLTDTATKDPEGYLGHPVNAFKLM 87

  Fly    96 RRLHQDWINWRKYMEQPVGIWQLKAFYSWKDELPTERDLWDACEGIARIQSTYDLKVGDFINGNI 160
            :||:.:|:.....:.:.:....:......:...|.:.|...|.:.:.|:|.||:|.......||:
 Frog    88 KRLNTEWVKLENLILKDISDGFISNLTIQRQYFPNDEDQTGAAKALLRLQDTYNLDTDTISKGNL 152

  Fly   161 NGKQYNDSMSTADILSVGAYLFMKNRPSDAIQ-----WLQEVPQRLQ--EELLIQPRHLPIKEVD 218
            .|.::..|::..|...:|     |...:||..     |:::...:|.  ||       ..:.:|.
 Frog   153 PGVKHKTSLTAEDCFDLG-----KTAYTDADYYHTELWMEQALSQLDAGEE-------SSLDKVM 205

  Fly   219 ALRLLAEAQIKDQNYSEALPLLHNCLKLQPHDAR----VLRLWKKTTDFIENQPDQSPTENKKRN 279
            .|..|:.|..:..:..:||.|....|:|.|...|    :..:..|.::...:.|.:......::.
 Frog   206 VLDYLSYAVYQQGDLDKALTLTKRSLELDPEHQRGNGNLRHIMSKESNKSSSSPSEGAELRTRKG 270

  Fly   280 VP----IANAFKLSCNGPLESST-----RLHC-FYNFTTTPFLRLAPLKTEQIGLDPYVVLYHEV 334
            .|    ....::..|.|.....|     ||.| :::....|.|.|:|.|.|.....|.:|.||::
 Frog   271 RPKDHLEKEKYEKLCRGEGVKMTSRRQKRLFCRYFDGKKDPLLILSPTKQEDEWDKPRIVRYHDI 335

  Fly   335 LSAREISMLIGKAAQNMKNTKIHKERAVPKKNRG---------------RTAKGFWLKKESNELT 384
            :|..|||.:              ||.|.|:..|.               |..|..||....:.:.
 Frog   336 ISDEEISKV--------------KELAKPRLRRATISNPITGVLETAQYRITKSAWLSGYEDPVV 386

  Fly   385 KRITRRIMDMTGFDLADSEGFQVINYGIGGHYFLHMDYFDFASSNHTDTRSRYSIDLGDRIATVL 449
            .|:.|||..:||.|::.:|..||.||||||.|..|   |||......|...:  :..|:|:||.|
 Frog   387 ARLNRRIEGVTGLDMSTAEELQVANYGIGGQYEPH---FDFLRKYEPDAFKK--LGTGNRVATWL 446

  Fly   450 FYLTDVEQGGATVFGDVGYYVSPQAGTAIFWYNLDTDGNGDPRTRHAACPVIVGSKWVMTEWIRE 514
            ||::|||.||||||.:||..|.|:.|||:|||||...|.||..||||||||:||:|||..:||.|
 Frog   447 FYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNLLESGEGDYSTRHAACPVLVGNKWVSNKWIHE 511

  Fly   515 KRQIFIRPC 523
            :.|.|.|||
 Frog   512 RGQEFRRPC 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31013NP_733394.3 P4Ha_N 31..160 CDD:285528 32/128 (25%)
TPR_11 178..248 CDD:290150 17/76 (22%)
TPR repeat 211..246 CDD:276809 8/34 (24%)
P4Hc 336..513 CDD:214780 80/191 (42%)
p4ha1XP_031761963.1 P4Ha_N 24..111 CDD:400573 22/86 (26%)
P4Hc 337..510 CDD:214780 80/191 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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