DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31013 and p4ha1b

DIOPT Version :9

Sequence 1:NP_733394.3 Gene:CG31013 / 326111 FlyBaseID:FBgn0051013 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_999856.1 Gene:p4ha1b / 100003675 ZFINID:ZDB-GENE-030131-4089 Length:536 Species:Danio rerio


Alignment Length:570 Identity:174/570 - (30%)
Similarity:250/570 - (43%) Gaps:100/570 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLVMLFHSTLVLGHRPLEKSHSLSLVTMVPLLELEKKLIDNLENYTNALEQKLEIIR------SQ 66
            ||..|||  .:..|.....|..    .|..||..||.|:.:|:.|....|.:||.::      ..
Zfish     7 LLSFLFH--FLYAHNDFFTSTG----QMTDLLYAEKDLVTSLKEYIKQEENRLEQVKEWADKLDS 65

  Fly    67 LLVIRAENEKGRRNAISYLSNPLNGFSIIRRLHQDWINWRKYMEQPVGIWQLKAFYSWKDELPTE 131
            |.:...::.:|      :|.:|:|.|.:::||:.:|.:....:.:......:......:...||:
Zfish    66 LTITATQDPEG------FLGHPVNAFKLMKRLNSEWSDLENLVLKDTTNGFISNLTVQRQYFPTD 124

  Fly   132 RDLWDACEGIARIQSTYDLKVGDFINGNINGKQYNDSMSTADILSVGAYLFMKNRPSDAIQ---- 192
            .|...|.:.:.|:|.||.|......:|::.|..:...|:..|...:|...:     |||..    
Zfish   125 EDQTGAAKALLRLQDTYQLSANAISSGDLPGVVHKSRMTVEDCYELGKIAY-----SDADYYHTE 184

  Fly   193 -WLQEVPQRLQEELLIQPRHLPIKEVDALRLLAEAQIKDQNYSEALPLLHNCLKLQPHDARVLRL 256
             |:.:...:|.|     ....||.:|..:..|:.|..:......||.|....|||.|:..|.   
Zfish   185 LWMAQALSQLDE-----GEESPIDKVTVMDYLSYAIYQQGELDRALELTKRMLKLDPNHHRA--- 241

  Fly   257 WKKTTDFIENQPD-QSPTENKKRN--------------------VPIANAFKLSCNG------PL 294
             .....:.|.|.: |...||:|:.                    :|....::..|.|      |.
Zfish   242 -NGNLKYFEFQLEKQRKAENEKKEEDQKRVLDKRDAQRKRSKDPLPERKKYERLCRGEGIKLTPR 305

  Fly   295 ESSTRLHCFY-NFTTTPFLRLAPLKTEQIGLDPYVVLYHEVLSAREISMLIGKAAQNMKNTKIHK 358
            ..| ||.|.| |....|.|.|||:|.|.....|.:|.|||::|..||..:              |
Zfish   306 RQS-RLFCRYSNNNRNPRLLLAPVKQEDEWDRPRIVRYHEIISDSEIETV--------------K 355

  Fly   359 ERAVPKKNRG---------------RTAKGFWLKKESNELTKRITRRIMDMTGFDLADSEGFQVI 408
            |.|.|:..|.               |.:|..||....:...:||.:||.|:||.::..:|..||.
Zfish   356 EMAKPRLRRATISNPITGVLETAPYRISKSAWLSGYEHSTIERINQRIEDVTGLEMDTAEELQVA 420

  Fly   409 NYGIGGHYFLHMDYFDFASSNHTDTRSRYSIDLGDRIATVLFYLTDVEQGGATVFGDVGYYVSPQ 473
            |||:||.|..|   |||...:..|...  .:..|:||||.|||::||..||||||.|||..|.|:
Zfish   421 NYGVGGQYEPH---FDFGRKDEPDAFK--ELGTGNRIATWLFYMSDVSAGGATVFTDVGAAVWPK 480

  Fly   474 AGTAIFWYNLDTDGNGDPRTRHAACPVIVGSKWVMTEWIREKRQIFIRPC 523
            .|||:|||||...|.||..||||||||:||:|||..:||.|:.|.|.|||
Zfish   481 KGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPC 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31013NP_733394.3 P4Ha_N 31..160 CDD:285528 30/134 (22%)
TPR_11 178..248 CDD:290150 18/74 (24%)
TPR repeat 211..246 CDD:276809 9/34 (26%)
P4Hc 336..513 CDD:214780 79/191 (41%)
p4ha1bNP_999856.1 P4Ha_N 24..153 CDD:285528 31/138 (22%)
TPR repeat 164..199 CDD:276809 8/44 (18%)
TPR_16 168..238 CDD:290168 19/79 (24%)
TPR repeat 204..234 CDD:276809 7/29 (24%)
P4Hc 347..520 CDD:214780 79/191 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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