DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obp57e and Obp19c

DIOPT Version :9

Sequence 1:NP_611488.1 Gene:Obp57e / 326110 FlyBaseID:FBgn0050145 Length:136 Species:Drosophila melanogaster
Sequence 2:NP_608392.1 Gene:Obp19c / 33039 FlyBaseID:FBgn0031111 Length:175 Species:Drosophila melanogaster


Alignment Length:84 Identity:25/84 - (29%)
Similarity:42/84 - (50%) Gaps:18/84 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 KCFLTCVLLDLGLI--DERGNV-QIDKYMKSGVVDWQWVAIELVT-----CRIEFSDERDLCELS 112
            ||.:.|||..:.|:  |.:.|| |::| :.|.|.....:||.:.:     |....| .::.||::
  Fly    93 KCLVECVLKKIKLMDADNKLNVGQVEK-LTSLVTQDNKMAIAVSSSMAQACSRGIS-SKNPCEVA 155

  Fly   113 YGIFN-CF------KDVKL 124
            : :|| |.      .:|||
  Fly   156 H-LFNQCISRQLERNNVKL 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp57eNP_611488.1 PhBP 28..123 CDD:214783 22/81 (27%)
Obp19cNP_608392.1 PhBP 65..164 CDD:214783 22/73 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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