DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Traf-like and TRAF5

DIOPT Version :9

Sequence 1:NP_727976.1 Gene:Traf-like / 32611 FlyBaseID:FBgn0030748 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_011508259.1 Gene:TRAF5 / 7188 HGNCID:12035 Length:631 Species:Homo sapiens


Alignment Length:485 Identity:109/485 - (22%)
Similarity:191/485 - (39%) Gaps:106/485 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RKDLTEQNQYQNQNENQNQPKSTTIVKYEKSSCLFCNE---WFDAQTFTEHLIHCGQVLEECPNG 70
            ||||.|.              .:...::.|..||:|.:   ..:.|...|:|  |.:....|||.
Human   224 RKDLKEH--------------LSASCQFRKEKCLYCKKDVVVINLQNHEENL--CPEYPVFCPNN 272

  Fly    71 CQAFIPRIRMRSHLKECPRNQHNLS-NQQRMSVSMDRLDRQSDQRLLVIEQDVGTIRSVLNEEIR 134
            |...|.:..:..||..||..:.:.. .....:|:..|.:.|..:            .|.|.|.:|
Human   273 CAKIILKTEVDEHLAVCPEAEQDCPFKHYGCAVTDKRRNLQQHE------------HSALREHMR 325

  Fly   135 QRLHLITDVGNIRKQNQVVEDWTRETEKAMDDLRRQMEEETNRKAFAIEQNQLDVQYCCDITQSL 199
            ..|                       ||.:     |:||:.:                 |:.:||
Human   326 LVL-----------------------EKNV-----QLEEQIS-----------------DLHKSL 345

  Fly   200 KEQVESRLDEAQKLVNQLSADVTYHQNQLNDNILKLEELIFENERLNREKFF--QIEEFLQQINE 262
             ||.||::.:..:.:.:|..:..........|...|..:......:::..:.  |:.:.||.:|:
Human   346 -EQKESKIQQLAETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMVNQ 409

  Fly   263 -----DIKTKLGNSDYVTSKQATLDYEVKNVKNIVCETEERCDKLDRALHQTMQNISDLETQMAM 322
                 |::..:...|.|..|...|:    |....:...||..:|     |.|..||.  :.|::.
Human   410 QQNKFDLRPLMEAVDTVKQKITLLE----NNDQRLAVLEEETNK-----HDTHINIH--KAQLSK 463

  Fly   323 -QQRIASVQN--IRGHLIWRIKDYSKKLEESKQYDTI-LHSAMFSNKAFGYALRLDIYLNGKGTW 383
             ::|...::.  ..|.|||::.||..|..|:....|: :.|..|.....||.|....||||.|:.
Human   464 NEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSG 528

  Fly   384 KGRNMIACLNVLSGEYDPLLAWPCRLQAEIIIRDQC--TNVADA--EDYVKTIFVRKKSDDFIQS 444
            :|.::.....|:.||:|.||.||.|.:..:::.||.  .|:.:.  .|...:.|.|...:..|.|
Human   529 RGSHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDGEMNIAS 593

  Fly   445 NQYFHIPHKVI-TSRN-YLRNDSMFIEVRV 472
            .....:.|.|: .::| |:::|::|::|.|
Human   594 GCPRFVAHSVLENAKNAYIKDDTLFLKVAV 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Traf-likeNP_727976.1 zf-TRAF_2 <54..88 CDD:292587 10/33 (30%)
MATH_TRAF_C 334..473 CDD:238168 45/146 (31%)
TRAF5XP_011508259.1 RING 109..145 CDD:214546
zf-TRAF 202..257 CDD:280357 10/46 (22%)
zf-TRAF 257..315 CDD:280357 15/59 (25%)
MATH 478..624 CDD:295307 45/146 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 90 1.000 Domainoid score I7790
eggNOG 1 0.900 - - E1_KOG0297
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10131
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.910

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