DRSC/TRiP Functional Genomics Resources

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Protein Alignment Traf-like and Rnf151

DIOPT Version :10

Sequence 1:NP_727976.1 Gene:Traf-like / 32611 FlyBaseID:FBgn0030748 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_080481.1 Gene:Rnf151 / 67504 MGIID:1914754 Length:239 Species:Mus musculus


Alignment Length:187 Identity:39/187 - (20%)
Similarity:70/187 - (37%) Gaps:46/187 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KSSSRKDLTEQNQYQNQNENQNQPKSTTIVKYE---KSSCLFCNEWFDAQTFTEHLIHCGQVLEE 66
            |..:|:.:.|.|:.:.           ||.:.:   |::...|.:........||...|...|..
Mouse    59 KEVTRRKMVEVNKLRK-----------TIGRLQVKCKNAAAGCLDTHPLAHRKEHQDSCPFELMA 112

  Fly    67 CPN-GCQAFIPRIRMRSHLKECPRN-------------------QHNLSNQQRMSVSMDRLDRQS 111
            ||| ||...:.|..:..|.:.|.:|                   .||...:.|.:    .:.|..
Mouse   113 CPNEGCTVQVLRGVLDEHRQHCQQNGQQRCPLGCGSTLAALEGEHHNCYRELRDA----WVQRHE 173

  Fly   112 DQRLLVIEQDVGTIR------SVLNEEIRQRLHLITDVGNIRKQNQVVE-DWTRETE 161
            ..|.|::.. :|.:|      |::::::.|..:.:.|..|:....||.| :.|.|.|
Mouse   174 RNRTLLLGL-LGRVRRVHLTTSIIHQQLAQLSNFLEDDDNLLLNAQVQETEVTPEAE 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Traf-likeNP_727976.1 SMC_prok_B <131..>336 CDD:274008 9/32 (28%)
MATH_TRAF_C 334..473 CDD:238168
Rnf151NP_080481.1 RING_Ubox 15..63 CDD:473075 1/3 (33%)
Sina 79..>134 CDD:460824 13/54 (24%)
Blue background indicates that the domain is not in the aligned region.

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