DRSC/TRiP Functional Genomics Resources

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Protein Alignment Traf-like and PDZRN3

DIOPT Version :10

Sequence 1:NP_727976.1 Gene:Traf-like / 32611 FlyBaseID:FBgn0030748 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_055824.1 Gene:PDZRN3 / 23024 HGNCID:17704 Length:1066 Species:Homo sapiens


Alignment Length:391 Identity:63/391 - (16%)
Similarity:136/391 - (34%) Gaps:123/391 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 EECPNGCQAFIPRIRMRSHLKECPRNQ--------HNLSNQQRMSVSM-DRLDRQSDQRLLVIEQ 120
            ||.|:..:.:.|...:....:|..|.:        :.:::|.::.::: .|.|.:.|..:.:.|.
Human   388 EEHPSAHEYYDPNDYIGDIHQEMDREELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEI 452

  Fly   121 DVGTIRS------------------VLNEEIRQRLHLITDVGN-------IRKQNQVVEDWTRET 160
            |..:|.:                  |.|.|  :.:.|:|...|       .|.:.|:.|.|..:.
Human   453 DPNSIAAKDGRIREGDRIIQINGIEVQNRE--EAVALLTSEENKNFSLLIARPELQLDEGWMDDD 515

  Fly   161 EK-AMDDLRRQMEEETNRKAFAIEQNQLDVQYCCDITQSLKEQVESRLDEAQKLVNQLSADVTYH 224
            .. .:|||...|.||.:.:|         :|:...:.|..|...:....:        :|.:..:
Human   516 RNDFLDDLHMDMLEEQHHQA---------MQFTASVLQQKKHDEDGGTTD--------TATILSN 563

  Fly   225 QNQLNDNILKLEELIFENERLNREKFFQIEEFLQQINEDIKT-----------------KLGNSD 272
            |::.:..:.:.:|....:|...:|.           |.|..|                 .||:.|
Human   564 QHEKDSGVGRTDESTRNDESSEQEN-----------NGDDATASSNPLAGQRKLTCSQDTLGSGD 617

  Fly   273 YVTSKQATLDYEVKNVKNIVCETEERCDKLDRALHQTMQNIS----------------------- 314
            ...|.::.:..:..:...:....:| |::....|....|..|                       
Human   618 LPFSNESFISADCTDADYLGIPVDE-CERFRELLELKCQVKSATPYGLYYPSGPLDAGKSDPESV 681

  Fly   315 DLETQMAMQQRIASVQ-----NIRGHLIWRIKDYSKKLEESKQYDTILHSAMFSNKAFGYALRLD 374
            |.|.:: :.:.:.|::     .:|.|.:       ::|:|..:...:||::.|.|    |...:|
Human   682 DKELEL-LNEELRSIELECLSIVRAHKM-------QQLKEQYRESWMLHNSGFRN----YNTSID 734

  Fly   375 I 375
            :
Human   735 V 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Traf-likeNP_727976.1 SMC_prok_B <131..>336 CDD:274008 39/257 (15%)
MATH_TRAF_C 334..473 CDD:238168 9/42 (21%)
PDZRN3NP_055824.1 RING-HC_LNX3 12..58 CDD:438378
Sina 69..>132 CDD:460824
PDZ1-PDZRN4-like 246..337 CDD:467199
PDZ2-PDZRN4-like 420..503 CDD:467200 13/84 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 545..603 9/76 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 744..778
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 808..863
Blue background indicates that the domain is not in the aligned region.

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