Protein Alignment Traf-like and syp-6

DIOPT Version :9

• Sequence 1: NP_727976.1
• Gene: Traf-like / 32611
• FlyBaseID: FBgn0030748
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: NP_001379336.1
• Gene: syp-6 / 172375
• WormBaseID: WBGene00019002
• Length: 694
• Species: Caenorhabditis elegans
• Alignment Length: 446
• Identity: 77/446 - (17%)
• Similarity: 170/446 - (38%)
• Gaps: 135/446 - (30%)

  Fly    25 QNQPKSTTIVK----YEKSSCLFCNEWFDAQTFTEHLI---HCGQVLEECPNGCQAFIPRIRMRS 82
            :|:.|..:|::    .||....|..:..|..  ..|.:   .|.||........:..:....:::
 Worm     9 ENEAKVKSIIRNNNLLEKKFSSFQRQCRDLS--RNHALLDSCCSQVKHSATAAEEMSVSDKDVKN 71

  Fly    83 HLKE----------------------CPRNQHNLSNQQRMSV---------SMDRLDRQSDQRLL 116
            |.|:                      |.:..|:|  ...|||         .:::..::.:..:.
 Worm    72 HQKKLHSFLAQSTDQVNSTIDKMDFFCSKGNHSL--PMEMSVLSITLPYEACIEKSAKKHETMVF 134

  Fly   117 VIEQDVGTIRSVLNEEIRQRLHLITDVGNIRKQNQVVEDWTRETEKAMDDLRRQMEEETNRKAFA 181
            .|::....::.:.||::           ::.|:.........:|||.:..|:.:::..||
 Worm   135 SIDEVSSAVQHLENEKV-----------DVEKRQSSTGKLIFQTEKEIMKLKEEIQVNTN----- 183

  Fly   182 IEQN--QLDVQYCCDITQS------LKEQVESRLDEA---------QKLVNQLSADVTYHQNQLN 229
            :|.|  ||.::....:..|      .|.::|..::||         |.:::|.||.:|.....||
 Worm   184 LESNIIQLSLEKLSSVKDSSTSENVYKAKLEEEINEARQIYEDALKQDVISQESAMMTQQLESLN 248

  Fly   230 D-----------NILKLE---------------ELIFENERLNREKFFQIEEFLQQI---NEDIK 265
            :           |:..:|               :.:.::|..|.|....:|..|:.|   |:.::
 Worm   249 ELCSDLSDLNKINLTSIEKFPDCNEVCELSDELQTLEKSEAENSESIINLEASLEDIKYQNKKVR 313

  Fly   266 ------TKLGNSDYVTSKQATLDYE--VKNVKNIVCETEERCDKLD---RALHQ--TMQNISDLE 317
                  .:|.|: |:..|:.....:  :::||..:.|::...:||.   ||:.:  |.:|: :.:
 Worm   314 KSFDQINQLENA-YIVKKEVLTRKKSAIEDVKRQIAESKITLNKLKVTVRAVERSDTPENV-ESK 376

  Fly   318 TQMAMQQRIAS--------------VQNIRGHLIWRIKDYSKKLEESKQYDTILHS 359
            .:.|.::.:||              |:|:...|  |.|.::::......:.::|.|
 Worm   377 KEEAFRRLVASSTELPGPESFQRDNVRNVEKSL--RFKKWNQRTTSQSSFTSVLDS 430

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf-like	NP_727976.1	zf-TRAF_2	<54..88	CDD:292587	6/58 (10%)
		MATH_TRAF_C	334..473	CDD:238168	5/26 (19%)
syp-6	NP_001379336.1	SMC_prok_B	<136..>349	CDD:274008	41/229 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000