Protein Alignment Traf-like and trf-2

DIOPT Version :10

• Sequence 1: NP_727976.1
• Gene: Traf-like / 32611
• FlyBaseID: FBgn0030748
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: NP_491534.2
• Gene: trf-2 / 172151
• WormBaseID: WBGene00022454
• Length: 335
• Species: Caenorhabditis elegans
• Alignment Length: 208
• Identity: 47/208 - (22%)
• Similarity: 89/208 - (42%)
• Gaps: 49/208 - (23%)

  Fly   303 DRALHQTM--QNISDLETQMAMQQRIASVQNIRGHLIW------RIKDYSK-------------- 345
            ||.||..:  |:::.:.|::.:||. |.|....|.|.:      ..:.|..
 Worm   109 DRNLHLVLLCQSLNPIRTKINIQQS-AYVDKYVGMLQYMSIAESAFEKYGSQHTFRIPKIGLTVV 172

  Fly   346 KLEESKQYDTILHSAMFSNKAFGYALRLDI--YLNGKGTWKGRNMIACLNVLSGEYDPLLAWP-- 406
            |..::|.:.:| :|..|.:..:||.:....  |.:|....:..::..||  :.||:|.:|.||
 Worm   173 KATKNKSHRSI-YSQPFYSHGYGYKMMAVAAPYGDGLAFREYFSVFVCL--MKGEWDDILEWPFR 234

  Fly   407 CRLQAEIIIRDQCTNVADAEDYVKTIFVRKKSD--DFIQ-----SNQYF----HIPHKVITSRNY 460
            |.:...|:..|:      .|...|||:|.:..:  :|::     .|..|    .:|...:|  .:
 Worm   235 CDVTFSILSDDK------KELLTKTIYVNEMPEIQEFLERPEGLRNGTFGFQNFLPLAKVT--EF 291

  Fly   461 LRNDSMFIEVRVL 473
            ..:..:||:::||
 Worm   292 AADGDIFIQIKVL 304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf-like	NP_727976.1	SMC_prok_B	<131..>336	CDD:274008	11/34 (32%)
		MATH_TRAF_C	334..473	CDD:238168	35/173 (20%)
trf-2	NP_491534.2	MATH_TRAF_C	158..304	CDD:238168	32/156 (21%)